RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 FAM72BQ86X60 149 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CCDC117Q8IWD4 279 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CCDC185Q8N715 623 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 DCAF4L2Q8NA75 395 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 MYOCQ99972 504 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 MUC3BQ9H195 1237 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 WDCPQ9H6R7 721 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 SLC25A13Q9UJS0 675 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 STAP1Q9ULZ2 295 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 NCKAP1Q9Y2A7 1128 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 PCDHGB2Q9Y5G2 931 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 SHROOM3Q8TF72 1996 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 TCRBV5S1A1TA0A578 114 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 LRRC72A6NJI9 287 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 GOLGA8CPA6NN73 597 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 MCF2LO15068 1137 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 PCDHGA12O60330 932 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 RNASEH1O60930 286 aaKnown RBP12.07□□□□□ -0.48
HDAC4-202ENST00000430200 ENDOD1O94919 500 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 UNGP13051 313 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-202ENST00000430200 ATP1A3P13637 1013 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 PRLRP16471 622 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 ZNF18P17022 549 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 RDXP35241 583 aaKnown RBP12.07□□□□□ -0.48
HDAC4-202ENST00000430200 SOX5P35711 763 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 ACVRL1P37023 503 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
HDAC4-202ENST00000430200 NXPH1P58417 271 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 BPIFB4P59827 614 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 SULT2A1Q06520 285 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 TEAD4Q15561 434 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 CCDC14Q49A88 953 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 SMYD5Q6GMV2 418 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 IL27RAQ6UWB1 636 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 DRC7Q8IY82 874 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 OR8D1Q8WZ84 308 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 SERAC1Q96JX3 654 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 PDCL3Q9H2J4 239 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 FZD3Q9NPG1 666 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 SLC12A6Q9UHW9 1150 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 WASF2Q9Y6W5 498 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 ATMQ13315 3056 aa12.07□□□□□ -0.48
HDAC4-202ENST00000430200 FAM149AA5PLN7 773 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 C2CD4BA6NLJ0 364 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 SPINT1O43278 529 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 CD38P28907 300 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 EPHA8P29322 1005 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 HDAC4P56524 1084 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 SCAPQ12770 1279 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 DNAJC3Q13217 504 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 E4F1Q66K89 784 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 CCNI2Q6ZMN8 369 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 ADAT2Q7Z6V5 191 aaKnown RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 NLRP14Q86W24 1093 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 MDM1Q8TC05 714 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 RHBDD1Q8TEB9 315 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 SAP25Q8TEE9 199 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 RXFP2Q8WXD0 754 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 KLK6Q92876 244 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 ELF4Q99607 663 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 ACE2Q9BYF1 805 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 RRN3Q9NYV6 651 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 LIMA1Q9UHB6 759 aaKnown RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 ZFR2Q9UPR6 939 aaKnown RBP12.06□□□□□ -0.48
HDAC4-202ENST00000430200 PCDHB9Q9Y5E1 797 aa12.06□□□□□ -0.48
HDAC4-202ENST00000430200 CACNA1GO43497 2377 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 ALOX15BO15296 676 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SRGAP2O75044 1071 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 TRIM16O95361 564 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 GKP32189 559 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 CHRNA3P32297 505 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 GRK6P43250 576 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SERPINH1P50454 418 aaKnown RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 BNIP3Q12983 259 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 HNRNPDQ14103 355 aaKnown RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 FGL2Q14314 439 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SFMBT2Q5VUG0 894 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SEL1L3Q68CR1 1132 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 LEKR1Q6ZMV7 388 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 DPY19L3Q6ZPD9 716 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 MON1BQ7L1V2 547 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SETD3Q86TU7 594 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 TRIM69Q86WT6 500 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 DNAAF5Q86Y56 855 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SLC22A18ASQ8N1D0 253 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 PYROXD2Q8N2H3 581 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 ATP11CQ8NB49 1132 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 TMEM145Q8NBT3 493 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 NETO2Q8NC67 525 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 OR6K2Q8NGY2 324 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 BAP1Q92560 729 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms