RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TBL1YQ9BQ87 522 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 DPEP3Q9H4B8 488 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 MINDY3Q9H8M7 445 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 PRPF19Q9UMS4 504 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 ADM5C9JUS6 153 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 HNRNPRO43390 633 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 CABYRO75952 493 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 CCDC166P0CW27 439 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 CHRM3P20309 590 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 INSCQ1MX18 579 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 SLC44A4Q53GD3 710 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 ZBTB46Q86UZ6 589 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 SLC25A23Q9BV35 468 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 PAIP1Q9H074 479 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 NXF3Q9H4D5 531 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 PDZD7Q9H5P4 517 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 MID1IP1Q9NPA3 183 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 GNEQ9Y223 722 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 BUD23O43709 281 aaKnown RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 GM2AP17900 193 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 ICAM3P32942 547 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 CSE1LP55060 971 aaKnown RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 NEDD8Q15843 81 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 MRNIPQ6NTE8 343 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 GK5Q6ZS86 529 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 PIWIL1Q96J94 861 aaKnown RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 RPRD1AQ96P16 312 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 ALG9Q9H6U8 611 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 DSEQ9UL01 958 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 RNF112Q9ULX5 631 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 STYXL1Q9Y6J8 313 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 LRP5O75197 1615 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 CPB1P15086 417 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 CYP2B6P20813 491 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 CNPY1Q3B7I2 92 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 SLC25A52Q3SY17 297 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 PPP1R2P1Q96PQ5 205 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 TRIM38O00635 465 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 TRAFD1O14545 582 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 KLF11O14901 512 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 AMHP03971 560 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 GNAZP19086 355 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 RALGDSQ12967 914 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 DCTN2Q13561 401 aaKnown RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 GRM3Q14832 879 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 SLC26A9Q7LBE3 791 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 NAT14Q8WUY8 206 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 VAT1Q99536 393 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 HAPLN2Q9GZV7 340 aa12.82□□□□□ -0.36
CPNE4-201ENST00000429747 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-201ENST00000429747 TSPAN3O60637 253 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 THP07101 528 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 CHRNGP07510 517 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 ATP5F1P24539 256 aaPredicted RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 TUBP50607 506 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RAP1GDS1P52306 607 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 NR1H2P55055 460 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 CYP51A1Q16850 503 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 PCID2Q5JVF3 399 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 TMEM198Q66K66 360 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 STRADAQ7RTN6 431 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 PTCD3Q96EY7 689 aaKnown RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 THUMPD3Q9BV44 507 aaKnown RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 FZD8Q9H461 694 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 CYTH4Q9UIA0 394 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RFPL1O75677 317 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 ADORA2AP29274 412 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 LIMK2P53671 638 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RAB10P61026 200 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 XIAPP98170 497 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 POU4F1Q01851 419 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 CCL15Q16663 113 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 LSM12Q3MHD2 195 aaKnown RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 SLC9B1Q4ZJI4 515 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RAB6CQ53S08 254 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 PIWIL4Q7Z3Z4 852 aaKnown RBP12.81□□□□□ -0.36
CPNE4-201ENST00000429747 ZNF555Q8NEP9 628 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RIN3Q8TB24 985 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RBBP8Q99708 897 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 C17orf80Q9BSJ5 609 aa12.81□□□□□ -0.36
CPNE4-201ENST00000429747 RAB6CQ9H0N0 254 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms