RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PABPC5Q96DU9 382 aaKnown RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 ZNF560Q96MR9 790 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 NDNQ99608 321 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 PRDM5Q9NQX1 630 aaPredicted RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 RBPJLQ9UBG7 517 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 UBQLN1Q9UMX0 589 aaKnown RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 SSC5DA1L4H1 1573 aa8.21□□□□□ -1.1
HPS4-205ENST00000429411 ZNFX1Q9P2E3 1918 aaKnown RBP8.21□□□□□ -1.1
HPS4-205ENST00000429411 MYOCOSA0A1B0GUC4 107 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 PRSS47A8MTI9 375 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FAM189A1O60320 539 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TRIM13O60858 407 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SNUPNO95149 360 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 HMBSP08397 361 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FAM163BP0C2L3 166 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 COX4I1P13073 169 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 GSTT1P30711 240 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 GABRB2P47870 512 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SLC26A2P50443 739 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SERPINB8P50452 374 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 GHRHRQ02643 423 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 DGKDQ16760 1214 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 NCBP2-AS2Q69YL0 99 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 KRT80Q6KB66 452 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 LRRC8EQ6NSJ5 796 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SLC27A1Q6PCB7 646 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 RPS27LQ71UM5 84 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 OTOP3Q7RTS5 596 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TTC39CQ8N584 583 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 URGCPQ8TCY9 931 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 DIS3LQ8TF46 1054 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 RCN3Q96D15 328 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 C12orf42Q96LP6 360 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 OR52B2Q96RD2 323 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 CYLDQ9NQC7 956 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 DDX43Q9NXZ2 648 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 CCDC167Q9P0B6 97 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 AURKCQ9UQB9 309 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 NUP205Q92621 2012 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 ATAD5Q96QE3 1844 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 ZBTB42B2RXF5 422 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 CCL22O00626 93 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 PRKAR2AP13861 404 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 EN2P19622 333 aaPredicted RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 GRK2P25098 689 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 ETFBP38117 255 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TM4SF4P48230 202 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 BEX3Q00994 111 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 MAP7Q14244 749 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TEDDM1Q5T9Z0 273 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 OLFML2BQ68BL8 750 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FSTL4Q6MZW2 842 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TMEM110Q86TL2 294 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TRIML2Q8N7C3 387 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 ENDOVQ8N8Q3 282 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 ANKRD52Q8NB46 1076 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 NPAS2Q99743 824 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 YIPF2Q9BWQ6 316 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 RHOBTB2Q9BYZ6 727 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SLC7A5P2Q9GIP4 190 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FOCADQ5VW36 1801 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 IGKV6D-21A0A0A0MT36 114 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 NEMP2A6NFY4 417 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 TMEM233B4DJY2 109 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 C9JVG2 144 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FKBP6O75344 327 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 MT-CYBP00156 380 aaPredicted RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 PGK1P00558 417 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 RANBP1P43487 201 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 GRIA4P48058 902 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 NR2C2P49116 596 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 RPS6KA3P51812 740 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SLC5A9Q2M3M2 681 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 RARS2Q5T160 578 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 TMC7Q7Z402 723 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 B3GALNT2Q8NCR0 500 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 LPPQ93052 612 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 VPS39Q96JC1 886 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 PRPF18Q99633 342 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 EPAS1Q99814 870 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 FICDQ9BVA6 458 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 ACE2Q9BYF1 805 aaPredicted RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 TKTL2Q9H0I9 626 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 Q9H521 79 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 S100A14Q9HCY8 104 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 VCX3AQ9NNX9 186 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 CDH22Q9UJ99 828 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 ZNF112Q9UJU3 913 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 SLC45A1Q9Y2W3 748 aa8.2□□□□□ -1.1
HPS4-205ENST00000429411 GOLGA4Q13439 2230 aaKnown RBP8.2□□□□□ -1.1
HPS4-205ENST00000429411 MYO7AQ13402 2215 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FAM72CH0Y354 149 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 M0QZ92 97 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PRKCHP24723 683 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 MATKP42679 507 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 MAGEA8P43361 318 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 CXCR3P49682 368 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms