RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 E5RJQ4 531 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 H3BN98 237 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 TSPAN3O60637 253 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 RECQL4O94761 1208 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ZCCHC18P0CG32 403 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 CSH1P0DML2 217 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 CSH2P0DML3 217 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 NPR3P17342 541 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 RPL9P32969 192 aaKnown RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 MLH1P40692 756 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 STAT5AP42229 794 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ZNF143P52747 638 aaPredicted RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 AIF1P55008 147 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 HECTD3Q5T447 861 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 PAGE2Q7Z2X7 111 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 RDH11Q8TC12 318 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 GDPD5Q8WTR4 605 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ANKZF1Q9H8Y5 726 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 INVSQ9Y283 1065 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ATP9AO75110 1047 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 FGD3Q5JSP0 725 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 STXBP5Q5T5C0 1151 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 C15orf52Q6ZUT6 534 aaKnown RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 PPP3R2Q96LZ3 170 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ZNF558Q96NG5 402 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 DUSP9Q99956 384 aaKnown RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 HDHD2Q9H0R4 259 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 DDX20Q9UHI6 824 aaKnown RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 GSTK1Q9Y2Q3 226 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 PIPSLA2A3N6 862 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 WWP2O00308 870 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 MAGEC1O60732 1142 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 ECDO95905 644 aaPredicted RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 COX7A2P14406 83 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 STK32CQ86UX6 486 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 RNF145Q96MT1 663 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ARHGEF3Q9NR81 526 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ANAPC2Q9UJX6 822 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 PTCH2Q9Y6C5 1203 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 WNT10BO00744 389 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ABCB1P08183 1280 aaPredicted RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 ITGA2P17301 1181 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 SSTR1P30872 391 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 IRF8Q02556 426 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 SPANXN2Q5MJ10 180 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 KRT74Q7RTS7 529 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 MLPHQ9BV36 600 aaPredicted RBP12.97□□□□□ -0.33
LDB3-205ENST00000429277 RACGAP1Q9H0H5 632 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 C2CD2Q9Y426 696 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.96□□□□□ -0.33
LDB3-205ENST00000429277 KCNK1O00180 336 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ATP5F1P24539 256 aaPredicted RBP12.96□□□□□ -0.33
LDB3-205ENST00000429277 GTF2BQ00403 316 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 TBX2Q13207 712 aaPredicted RBP12.96□□□□□ -0.33
LDB3-205ENST00000429277 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.33
LDB3-205ENST00000429277 ZNF618Q5T7W0 954 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 IL27RAQ6UWB1 636 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 TRIM63Q969Q1 353 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 S100A13Q99584 98 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 LRRC10BA6NIK2 292 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 FTH1P02794 183 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 TSPAN19P0C672 248 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 CCNA2P20248 432 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 RBL1P28749 1068 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 CLK3P49761 638 aaKnown RBP12.96□□□□□ -0.33
LDB3-205ENST00000429277 FAAP100Q0VG06 881 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 TTC23Q5W5X9 447 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ARCQ7LC44 396 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 POLNQ7Z5Q5 900 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 SNX32Q86XE0 403 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 AENQ8WTP8 325 aaKnown RBP12.96□□□□□ -0.33
LDB3-205ENST00000429277 ZNF670Q9BS34 389 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 KLHL25Q9H0H3 589 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ATP13A3Q9H7F0 1226 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 MORF4L1Q9UBU8 362 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 OR12D3Q9UGF7 316 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 CYP1A2P05177 515 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 BDNFP23560 247 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 FMO4P31512 558 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 RTP1P59025 263 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 SQLEQ14534 574 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ARMC3Q5W041 872 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 PMF1Q6P1K2 205 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms