RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 E7ENQ6 273 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 FOXN3O00409 490 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 BTN3A1O00481 513 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 S100A3P33764 101 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 GSTM5P46439 218 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MTAPQ13126 283 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ZSWIM7Q19AV6 140 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 KLHL35Q6PF15 583 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MARK2Q7KZI7 788 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ELMO1Q92556 727 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MKL1Q969V6 931 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 PDLIM2Q96JY6 352 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 POLR1EQ9GZS1 481 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 NDUFA13Q9P0J0 144 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 TMCO1Q9UM00 188 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 TNPO3Q9Y5L0 923 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 LTFP02788 710 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SLURP2P0DP57 97 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ACAT1P24752 427 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 RPL9P32969 192 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 RCVRNP35243 200 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ATP5C1P36542 298 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MMP13P45452 471 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 NR2C2P49116 596 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 DEFB115Q30KQ5 88 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 IQSEC1Q6DN90 963 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 LLGL2Q6P1M3 1020 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF621Q6ZSS3 439 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 CPNE1Q99829 537 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 KCNN2Q9H2S1 579 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ABCC13Q9NSE7 274 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MBD2Q9UBB5 411 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 COPG2Q9UBF2 871 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 GNPTGQ9UJJ9 305 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 TSPAN16Q9UKR8 245 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 QSOX1O00391 747 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 FMO4P31512 558 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 INTS11Q5TA45 600 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 KIAA0408Q6ZU52 694 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 PAGE2Q7Z2X7 111 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 FAM126BQ8IXS8 530 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 GRIN3AQ8TCU5 1115 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 TTLL2Q9BWV7 592 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 TPRKBQ9Y3C4 175 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MRC1P22897 1456 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 A0A087X1B8 175 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 PDE9AO76083 593 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 PROSCO94903 275 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 GZMAP12544 262 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 NDST1P52848 882 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 RGMBQ6NW40 437 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 MZT2AQ6P582 158 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ULK2Q8IYT8 1036 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 NEK7Q8TDX7 302 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 EEF1AKMT1Q8WVE0 214 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 LRRC39Q96DD0 335 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SEPHS2Q99611 448 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM120AQ9BXJ8 343 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 HMG20AQ9NP66 347 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 HACD1B0YJ81 288 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 MCIDASD6RGH6 385 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 MED26O95402 600 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ADH1AP07327 375 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CALB2P22676 271 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PDX1P52945 283 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TAS1R2Q8TE23 839 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ATG4AQ8WYN0 398 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ZIM3Q96PE6 472 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 KLHL4Q9C0H6 718 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ASB7Q9H672 318 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CYLDQ9NQC7 956 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM216Q9P0N5 145 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 LIMD1Q9UGP4 676 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 MRTO4Q9UKD2 239 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CROTQ9UKG9 612 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 SLC27A6Q9Y2P4 619 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PCDHA3Q9Y5H8 950 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 LYVE1Q9Y5Y7 322 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 RPL4P36578 427 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ARHGDIBP52566 201 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ATP13A4Q4VNC1 1196 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TTI2Q6NXR4 508 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 GPSM1Q86YR5 675 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ENKURQ8TC29 256 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM121Q9BTD3 319 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CATSPERZQ9NTU4 200 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 SLC24A2Q9UI40 661 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 A8MX80 341 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 LGALS2P05162 132 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 LYNP07948 512 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 NFKB1P19838 968 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PAX3P23760 479 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ACADLP28330 430 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CHKAP35790 457 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ITGADQ13349 1161 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms