RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 NINJ2Q9NZG7 142 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 TMCC3Q9ULS5 477 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 PCDHB9Q9Y5E1 797 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 SNX10Q9Y5X0 201 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 UBDO15205 165 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 PAPSS1O43252 624 aaPredicted RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 AVILO75366 819 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 USP1O94782 785 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 UMPSP11172 480 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 TGM3Q08188 693 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 TMEM63BQ5T3F8 832 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 PRSS55Q6UWB4 352 aaPredicted RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 TNIP2Q8NFZ5 429 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 TMBIM4Q9HC24 238 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 VPS45Q9NRW7 570 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 PRKAG3Q9UGI9 489 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 SIGLEC16A6NMB1 481 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 FFAR2O15552 330 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 KRT16P08779 473 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 GP5P40197 560 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 NR2C2P49116 596 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 FAM182AQ5T1J6 154 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 GRTP1Q5TC63 336 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 PAPD7Q5XG87 772 aaKnown RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 LBX2Q6XYB7 198 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 ATG16L2Q8NAA4 619 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.87□□□□□ -0.83
SNX13-203ENST00000428135 SMG7Q92540 1137 aaKnown RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 FERD3LQ96RJ6 166 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.87□□□□□ -0.83
SNX13-203ENST00000428135 EXO5Q9H790 373 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 SAC3D1A6NKF1 404 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 RRM2P31350 389 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 SEMG2Q02383 582 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 ANKRD52Q8NB46 1076 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
SNX13-203ENST00000428135 THAP11Q96EK4 314 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 TCF25Q9BQ70 676 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 NAT9Q9BTE0 207 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 C1QTNF7Q9BXJ2 289 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 TNKS2Q9H2K2 1166 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 ZC4H2Q9NQZ6 224 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 ZSCAN32Q9NX65 697 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 RNF186Q9NXI6 227 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 CD84Q9UIB8 345 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 GABRQQ9UN88 632 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 SLC9A8Q9Y2E8 581 aa9.87□□□□□ -0.83
SNX13-203ENST00000428135 MYO9BQ13459 2157 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 A0A0G2JLL6 359 aaPredicted RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 STBD1O95210 358 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 ERBB2P04626 1255 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 KCNA3P22001 575 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 NOS3P29474 1203 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 FLT3P36888 993 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 FEN1P39748 380 aaKnown RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 CHRNB3Q05901 458 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 ARSHQ5FYA8 562 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 SPANXN3Q5MJ09 141 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 OTUD3Q5T2D3 398 aaPredicted RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 ABHD15Q6UXT9 468 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 PRRT2Q7Z6L0 340 aaPredicted RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 RASAL3Q86YV0 1011 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 SUGP1Q8IWZ8 645 aaKnown RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 MAGEB18Q96M61 343 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 ARHGAP39Q9C0H5 1083 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 PRDM12Q9H4Q4 367 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 EFCAB1Q9HAE3 211 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 SCN3BQ9NY72 215 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 RBPJLQ9UBG7 517 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 TRHDEQ9UKU6 1024 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 ISM1B1AKI9 464 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 OPLAHO14841 1288 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 CST3P01034 146 aaPredicted RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 KRT6AP02538 564 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 KRT6BP04259 564 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 KRT6CP48668 564 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 EIF2B5Q13144 721 aaKnown RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 CTBP1Q13363 440 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 LRRC73Q5JTD7 316 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 CYP2R1Q6VVX0 501 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 LZTR1Q8N653 840 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 JOSD2Q8TAC2 188 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 CCT7Q99832 543 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 DPEP3Q9H4B8 488 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 GIT1Q9Y2X7 761 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 TCF3P15923 654 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 FGD3Q5JSP0 725 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 TMEM154Q6P9G4 183 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 MICU2Q8IYU8 434 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 USP7Q93009 1102 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 PPP1R14AQ96A00 147 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 FCRL2Q96LA5 508 aaPredicted RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 ZFP14Q9HCL3 533 aa9.86□□□□□ -0.83
SNX13-203ENST00000428135 DDX28Q9NUL7 540 aaKnown RBP9.86□□□□□ -0.83
SNX13-203ENST00000428135 OPTCQ9UBM4 332 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms