RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 AADATQ8N5Z0 425 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 NIPA2Q8N8Q9 360 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 C12orf50Q8NA57 414 aaPredicted RBP17.06■□□□□ 0.32
VRK2-204ENST00000428021 OR2A12Q8NGT7 310 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 DNASE2BQ8WZ79 361 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 FOXJ1Q92949 421 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 NCAPGQ9BPX3 1015 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 NEUROG2Q9H2A3 272 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 C6orf106Q9H6K1 298 aaPredicted RBP17.06■□□□□ 0.32
VRK2-204ENST00000428021 ANAPC7Q9UJX3 599 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 PPM1HQ9ULR3 514 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 ACTL7AQ9Y615 435 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 DNAH14Q0VDD8 3507 aa17.06■□□□□ 0.32
VRK2-204ENST00000428021 CXorf51AA0A1B0GTR3 108 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 A0A1W2PP55 124 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 AKR1B15C9JRZ8 316 aaPredicted RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 IL1BP01584 269 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 C5AR1P21730 350 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 MAOBP27338 520 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 HTR7P34969 479 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 HOXD12P35452 270 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 ETFBP38117 255 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 SERPINH1P50454 418 aaKnown RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 ZNF75DP51815 510 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 IRX4P78413 519 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 PIGHQ14442 188 aaPredicted RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 POLD3Q15054 466 aaPredicted RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 TSR1Q2NL82 804 aaKnown RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 RETSATQ6NUM9 610 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 PSTKQ8IV42 348 aaKnown RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 CNGA4Q8IV77 575 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 TC2NQ8N9U0 490 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 OR8D1Q8WZ84 308 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 KLC2Q9H0B6 622 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 BTBD1Q9H0C5 482 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 PCED1AQ9H1Q7 454 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 CATSPERBQ9H7T0 1116 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 NHEJ1Q9H9Q4 299 aaPredicted RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 SGK2Q9HBY8 427 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 DLL3Q9NYJ7 618 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 IP6K2Q9UHH9 426 aa17.05■□□□□ 0.32
VRK2-204ENST00000428021 EVLQ9UI08 416 aaPredicted RBP17.05■□□□□ 0.32
VRK2-204ENST00000428021 LNP1A1A4G5 178 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 C10orf142B7Z368 130 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 RNF103O00237 685 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 KHNYNO15037 678 aaKnown RBP17.04■□□□□ 0.32
VRK2-204ENST00000428021 ALOX15BO15296 676 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 FGF10O15520 208 aaPredicted RBP17.04■□□□□ 0.32
VRK2-204ENST00000428021 KDELR3O43731 214 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 AKR1B10O60218 316 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 BNIP3LO60238 219 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 SEMA4FO95754 770 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 ADH1BP00325 375 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 CTSLP07711 333 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 GOT1P17174 413 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 DRD3P35462 400 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 DPP6P42658 865 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 TPI1P60174 286 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 AASDHQ4L235 1098 aaPredicted RBP17.04■□□□□ 0.32
VRK2-204ENST00000428021 SYCP2LQ5T4T6 812 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 DCAF12L1Q5VU92 463 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 TXNRD3NBQ6F5E7 133 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 C22orf39Q6P5X5 142 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 SLC23A3Q6PIS1 610 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 UMODL1-AS1Q8N2C9 162 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 HDDC3Q8N4P3 179 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 CHST14Q8NCH0 376 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 ZNF564Q8TBZ8 553 aaPredicted RBP17.04■□□□□ 0.32
VRK2-204ENST00000428021 GANCQ8TET4 914 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 FAM131CQ96AQ9 280 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 CEP44Q9C0F1 390 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 TNKS2Q9H2K2 1166 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 DEF6Q9H4E7 631 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 NCKAP1Q9Y2A7 1128 aa17.04■□□□□ 0.32
VRK2-204ENST00000428021 RASA4BC9J798 803 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 MYO1FO00160 1098 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 EEF2KO00418 725 aaKnown RBP17.03■□□□□ 0.32
VRK2-204ENST00000428021 PLK4O00444 970 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 RASA4O43374 803 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 RNASEH2AO75792 299 aaKnown RBP17.03■□□□□ 0.32
VRK2-204ENST00000428021 H2AFZP0C0S5 128 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 ID4P47928 161 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 YBEYP58557 167 aaPredicted RBP17.03■□□□□ 0.32
VRK2-204ENST00000428021 SLC25A11Q02978 314 aaKnown RBP17.03■□□□□ 0.32
VRK2-204ENST00000428021 DUOXA1Q1HG43 343 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 BOLA3Q53S33 107 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 TRIM61Q5EBN2 209 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 KCNT1Q5JUK3 1230 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 WDR45BQ5MNZ6 344 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 RFX8Q6ZV50 586 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 H2AFVQ71UI9 128 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 DSG4Q86SJ6 1040 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 CPNE8Q86YQ8 564 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 RGL4Q8IZJ4 473 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 C1orf216Q8TAB5 229 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 PIP4K2CQ8TBX8 421 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms