RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SPON2Q9BUD6 331 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 ACE2Q9BYF1 805 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-202ENST00000427943 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 TNKS2Q9H2K2 1166 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 KLK13Q9UKR3 277 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 PPM1HQ9ULR3 514 aa18.84■□□□□ 0.61
PSPC1-202ENST00000427943 C10orf142B7Z368 130 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CBX4O00257 560 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 WNT9AO14904 365 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CBFA2T3O75081 653 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 WNT1P04628 370 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CALB1P05937 261 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CTSLP07711 333 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 MAT2AP31153 395 aaKnown RBP18.83■□□□□ 0.6
PSPC1-202ENST00000427943 RFC1P35251 1148 aaPredicted RBP18.83■□□□□ 0.6
PSPC1-202ENST00000427943 ADRA1BP35368 520 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CTSKP43235 329 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 PTPN9P43378 593 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 HDAC4P56524 1084 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 GSCP56915 257 aaPredicted RBP18.83■□□□□ 0.6
PSPC1-202ENST00000427943 C21orf59P57076 290 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 ARL13BQ3SXY8 428 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 MANEALQ5VSG8 457 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 AGBL4Q5VU57 503 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 UNQ6494/PRO21346Q6UXR6 183 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 MON1BQ7L1V2 547 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 STRADAQ7RTN6 431 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CHCHD4Q8N4Q1 142 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 CCDC185Q8N715 623 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 C3orf20Q8ND61 904 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 OR2A12Q8NGT7 310 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 AGPAT1Q99943 283 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 NAT10Q9H0A0 1025 aaKnown RBP18.83■□□□□ 0.6
PSPC1-202ENST00000427943 ATP13A1Q9HD20 1204 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 BTBD3Q9Y2F9 522 aa18.83■□□□□ 0.6
PSPC1-202ENST00000427943 ILVBLA1L0T0 632 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FAM72CH0Y354 149 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 RNF103O00237 685 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 KPNA3O00505 521 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-202ENST00000427943 VILLO15195 856 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FLRT2O43155 660 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 SLC7A4O43246 635 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 PLRG1O43660 514 aaKnown RBP18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FTH1P19P0C7X4 201 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 GPD1P21695 349 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 CCT8P50990 548 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 GNA12Q03113 381 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FAM72AQ5TYM5 149 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FAM72DQ6L9T8 149 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 RWDD4Q6NW29 188 aaKnown RBP18.82■□□□□ 0.6
PSPC1-202ENST00000427943 WDR59Q6PJI9 974 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FAM72BQ86X60 149 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 PNPLA1Q8N8W4 532 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 CHST14Q8NCH0 376 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 GRIN3AQ8TCU5 1115 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 SERAC1Q96JX3 654 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 CCDC114Q96M63 670 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 NDFIP2Q9NV92 336 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 PPARGC1AQ9UBK2 798 aaKnown RBP18.82■□□□□ 0.6
PSPC1-202ENST00000427943 OR12D3Q9UGF7 316 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 NEU3Q9UQ49 428 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 FARP1Q9Y4F1 1045 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-202ENST00000427943 PCDHGB2Q9Y5G2 931 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 ACTL7AQ9Y615 435 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 PLXNB3Q9ULL4 1909 aa18.82■□□□□ 0.6
PSPC1-202ENST00000427943 SPEGQ15772 3267 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 CCP110O43303 1012 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 ZMPSTE24O75844 475 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 KRT37O76014 449 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 FERP16591 822 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 CD38P28907 300 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 CHRNA3P32297 505 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 ACVRL1P37023 503 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 CLCN6P51797 869 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 ARF5P84085 180 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 ZNF423Q2M1K9 1284 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 PRAMEF14Q5SWL7 426 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 DNAJC24Q6P3W2 148 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 ZNF783Q6ZMS7 281 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-202ENST00000427943 ARRDC3Q96B67 414 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 MCEEQ96PE7 176 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 BPIFA3Q9BQP9 254 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 TMEM121BQ9BXQ6 578 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-202ENST00000427943 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
PSPC1-202ENST00000427943 DNAI1Q9UI46 699 aa18.81■□□□□ 0.6
PSPC1-202ENST00000427943 TRPM6Q9BX84 2022 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 A0A1W2PR77 199 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 TCRBV5S1A1TA0A578 114 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 LATO43561 262 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 LRIG2O94898 1065 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 SERPINH1P50454 418 aaKnown RBP18.8■□□□□ 0.6
PSPC1-202ENST00000427943 TAS2R38P59533 333 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 NRG1Q02297 640 aaPredicted RBP18.8■□□□□ 0.6
PSPC1-202ENST00000427943 C1QBPQ07021 282 aaKnown RBP18.8■□□□□ 0.6
PSPC1-202ENST00000427943 PIP5KL1Q5T9C9 394 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 NAPEPLDQ6IQ20 393 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 BAHD1Q8TBE0 780 aaPredicted RBP18.8■□□□□ 0.6
PSPC1-202ENST00000427943 RHBDD1Q8TEB9 315 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 BAP1Q92560 729 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms