RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SLC31A1O15431 190 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 ENTPD5O75356 428 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 CYP3A5P20815 502 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 DGKGP49619 791 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 RGS4P49798 205 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 SPOCD1Q6ZMY3 1216 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PPIL6Q8IXY8 311 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 TRPV1Q8NER1 839 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PCYT2Q99447 389 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 THTPAQ9BU02 230 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 DZANK1Q9NVP4 752 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 HEATR9A2RTY3 570 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 B2RBV5 119 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 IFRD1O00458 451 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 LAMTOR5O43504 91 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 C1RP00736 705 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 ACADSP16219 412 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 HOXD13P35453 343 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 GAD2Q05329 585 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PTK6Q13882 451 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 TEAD2Q15562 447 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 MPPE1Q53F39 396 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 CHST9Q7L1S5 443 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 TRAPPC5Q8IUR0 188 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 CMTR2Q8IYT2 770 aaKnown RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 ZSCAN18Q8TBC5 510 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 CKAP2Q8WWK9 683 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PAFAH2Q99487 392 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 SLCO1B3Q9NPD5 702 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 APOBEC2Q9Y235 224 aaKnown RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 WNT6Q9Y6F9 365 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 MGEA5O60502 916 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 CYP1A2P05177 515 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 FBXW4P57775 412 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 LPAL2Q16609 132 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 DCAF12L1Q5VU92 463 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 MYLIPQ8WY64 445 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 FCRL2Q96LA5 508 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 LRRC19Q9H756 370 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 C20orf96Q9NUD7 363 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-204ENST00000427724 PDP2Q9P2J9 529 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 TMEM59LQ9UK28 342 aa10.83□□□□□ -0.68
TCOF1-204ENST00000427724 TRIM49D1C9J1S8 452 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 ATP6V1B1P15313 513 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 PSMD8P48556 350 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 SPIRE1Q08AE8 756 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 PDK2Q15119 407 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 INSCQ1MX18 579 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 RNF220Q5VTB9 566 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 MTSS1LQ765P7 747 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 MAGEC3Q8TD91 643 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 GPR62Q9BZJ7 368 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 MYLK2Q9H1R3 596 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 DPEP3Q9H4B8 488 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 EBF3Q9H4W6 596 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 KIAA1522Q9P206 1035 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 ADAMTS5Q9UNA0 930 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 R3HDM2Q9Y2K5 976 aaKnown RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 STXBP5LQ9Y2K9 1186 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 TMEM265A0A087WTH1 108 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 TBX18O95935 607 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 ITGB6P18564 788 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 TPP2P29144 1249 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 MRPS5P82675 430 aaKnown RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 PTK2BQ14289 1009 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 SNAP47Q5SQN1 464 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 SCAMP5Q8TAC9 235 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 RPL10LQ96L21 214 aaKnown RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 FICDQ9BVA6 458 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 SPATA16Q9BXB7 569 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 CD207Q9UJ71 328 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 KAT6AQ92794 2004 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 DNALI1O14645 258 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 TEX28O15482 410 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 STBD1O95210 358 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 HALP42357 657 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 PRKAA1Q13131 559 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 MROH9Q5TGP6 573 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 ISLR2Q6UXK2 745 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 FAM183BPQ6ZVS7 135 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 CCDC3Q9BQI4 270 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 SMG9Q9H0W8 520 aaKnown RBP10.82□□□□□ -0.68
TCOF1-204ENST00000427724 RGS18Q9NS28 235 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 TDP1Q9NUW8 608 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 PAK5Q9P286 719 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 ZNF510Q9Y2H8 683 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 NCOR1O75376 2440 aa10.82□□□□□ -0.68
TCOF1-204ENST00000427724 RHOBTB1O94844 696 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 POLBP06746 335 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MYOGP15173 224 aa10.81□□□□□ -0.68
TCOF1-204ENST00000427724 PTDSS1P48651 473 aaKnown RBP10.81□□□□□ -0.68
TCOF1-204ENST00000427724 MORF4L2Q15014 288 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms