RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 SPON2Q9BUD6 331 aa18.89■□□□□ 0.61
MSH5-207ENST00000425703 NEUROG2Q9H2A3 272 aa18.89■□□□□ 0.61
MSH5-207ENST00000425703 SERGEFQ9UGK8 458 aa18.89■□□□□ 0.61
MSH5-207ENST00000425703 LAMA1P25391 3075 aa18.89■□□□□ 0.61
MSH5-207ENST00000425703 A0A1W2PP55 124 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 LRRC72A6NJI9 287 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 C1QTNF3-AMACRE9PGA6 284 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 BCAT2O15382 392 aaPredicted RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 SLC7A4O43246 635 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 ATMINO43313 823 aaPredicted RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 RAMP2O60895 175 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 EPHB2P29323 1055 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 CASP14P31944 242 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 SERPINH1P50454 418 aaKnown RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 ATXN3P54252 364 aaPredicted RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 GALCP54803 685 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 GEMIN4P57678 1058 aaKnown RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 TRIM14Q14142 442 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 ACAP1Q15027 740 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 SPECC1LQ69YQ0 1117 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 PSTKQ8IV42 348 aaKnown RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 HDDC3Q8N4P3 179 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 RTL3Q8N8U3 475 aaKnown RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 TMIEQ8NEW7 156 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 OR2A12Q8NGT7 310 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 OR2T34Q8NGX1 318 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 ARHGEF2Q92974 986 aaKnown RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 BIRC7Q96CA5 298 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.88■□□□□ 0.61
MSH5-207ENST00000425703 MAGEB5Q9BZ81 275 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 KDM4CQ9H3R0 1056 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 NDFIP2Q9NV92 336 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 DONSONQ9NYP3 566 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 EIF2B4Q9UI10 523 aaKnown RBP18.88■□□□□ 0.61
MSH5-207ENST00000425703 DOCK4Q8N1I0 1966 aa18.88■□□□□ 0.61
MSH5-207ENST00000425703 WASH4PA8MWX3 477 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 K7ERQ8 282 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 FGF10O15520 208 aaPredicted RBP18.87■□□□□ 0.61
MSH5-207ENST00000425703 SMAD6O43541 496 aaKnown RBP18.87■□□□□ 0.61
MSH5-207ENST00000425703 RNF8O76064 485 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 GLDCP23378 1020 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 CD27P26842 260 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 DRD3P35462 400 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 ARF5P84085 180 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 ZNF252P-AS1Q0IIN9 211 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 NFKBIBQ15653 356 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 CACNA1EQ15878 2313 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 KIAA0895LQ68EN5 471 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 C22orf39Q6P5X5 142 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 LINGO4Q6UY18 593 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 PLPP6Q8IY26 295 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 PYROXD2Q8N2H3 581 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 ZCCHC9Q8N567 271 aaKnown RBP18.87■□□□□ 0.61
MSH5-207ENST00000425703 PCDH20Q8N6Y1 951 aaKnown RBP18.87■□□□□ 0.61
MSH5-207ENST00000425703 CEP192Q8TEP8 1941 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 ISG20Q96AZ6 181 aaKnown RBP18.87■□□□□ 0.61
MSH5-207ENST00000425703 MIR1-1HGQ9H1L0 117 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 CATSPERBQ9H7T0 1116 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 DNAI1Q9UI46 699 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 SARDHQ9UL12 918 aa18.87■□□□□ 0.61
MSH5-207ENST00000425703 CNOT1A5YKK6 2376 aaKnown RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 PI4KAP42356 2102 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 ZSCAN5CA6NGD5 496 aaPredicted RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 UPK3BL1B0FP48 263 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 UPK3BL2E5RIL1 263 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 IGHV4-34P06331 123 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 CCR5P51681 352 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 AFF3P51826 1226 aaKnown RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 ZNF135P52742 658 aaPredicted RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 ADPRHP54922 357 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 YBEYP58557 167 aaPredicted RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 CCDC15Q0P6D6 951 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 POLD3Q15054 466 aaPredicted RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 PPM1JQ5JR12 505 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 NCEH1Q6PIU2 408 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 DNAAF5Q86Y56 855 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 ARFGAP1Q8N6T3 406 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 PIP4K2CQ8TBX8 421 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 DNAAF2Q9NVR5 837 aaKnown RBP18.86■□□□□ 0.61
MSH5-207ENST00000425703 HPCAL4Q9UM19 191 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 NCOR2Q9Y618 2525 aa18.86■□□□□ 0.61
MSH5-207ENST00000425703 A0A087X0T9 212 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 CREB3O43889 395 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 ZNF821O75541 412 aaPredicted RBP18.85■□□□□ 0.61
MSH5-207ENST00000425703 FSBPO95073 299 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 PRNPP04156 253 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 FAM228BP0C875 321 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 CSRP1P21291 193 aaKnown RBP18.85■□□□□ 0.61
MSH5-207ENST00000425703 CHRNA3P32297 505 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 PCK1P35558 622 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 ACVRL1P37023 503 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 MAPK8P45983 427 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 RECQLP46063 649 aaPredicted RBP18.85■□□□□ 0.61
MSH5-207ENST00000425703 SLC14A1Q13336 389 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 PARP15Q460N3 678 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 ERMARDQ5T6L9 678 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 ALKBH5Q6P6C2 394 aaKnown RBP18.85■□□□□ 0.61
MSH5-207ENST00000425703 IL27RAQ6UWB1 636 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 UMODL1-AS1Q8N2C9 162 aa18.85■□□□□ 0.61
MSH5-207ENST00000425703 MINDY1Q8N5J2 469 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms