RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 PAPOLAP51003 745 aaKnown RBP22.39■■□□□ 1.17
HMGA2-205ENST00000425208 NRLP54845 237 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 CAMK2GQ13555 558 aaPredicted RBP22.39■■□□□ 1.17
HMGA2-205ENST00000425208 ANO7Q6IWH7 933 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 MFSD7Q6UXD7 560 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 UBL4BQ8N7F7 174 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 HMGB4Q8WW32 186 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 FAM126AQ9BYI3 521 aaPredicted RBP22.39■■□□□ 1.17
HMGA2-205ENST00000425208 FBRSQ9HAH7 460 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 PRDM16Q9HAZ2 1276 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 CD248Q9HCU0 757 aa22.39■■□□□ 1.17
HMGA2-205ENST00000425208 BCCIPQ9P287 314 aaKnown RBP eCLIP22.39■■□□□ 1.17
HMGA2-205ENST00000425208 TARSL2A2RTX5 802 aaKnown RBP22.38■■□□□ 1.17
HMGA2-205ENST00000425208 CDKN2BP42772 138 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 RWDD2BP57060 319 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 PAFAH1B3Q15102 231 aaKnown RBP22.38■■□□□ 1.17
HMGA2-205ENST00000425208 DLG2Q15700 870 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 TFDP3Q5H9I0 405 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 SPOCD1Q6ZMY3 1216 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 RFX6Q8HWS3 928 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 PQLC3Q8N755 202 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 NETO2Q8NC67 525 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 MDGA1Q8NFP4 955 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 FRS2Q8WU20 508 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 UBE2Q2Q8WVN8 375 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 SP110Q9HB58 689 aa22.38■■□□□ 1.17
HMGA2-205ENST00000425208 PACSIN2Q9UNF0 486 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-205ENST00000425208 MUC6Q6W4X9 2439 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 APOL1O14791 398 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 MFSD11O43934 449 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 SP9P0CG40 484 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 ZFXP17010 805 aaPredicted RBP22.37■■□□□ 1.17
HMGA2-205ENST00000425208 SLC9A4Q6AI14 798 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 C22orf39Q6P5X5 142 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 METTL3Q86U44 580 aaKnown RBP22.37■■□□□ 1.17
HMGA2-205ENST00000425208 RASSF3Q86WH2 238 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 PRSS33Q8NF86 280 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 TRIM58Q8NG06 486 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 OR2T3Q8NH03 318 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 CEP44Q9C0F1 390 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 MTG2Q9H4K7 406 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 PRSS16Q9NQE7 514 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 EBF1Q9UH73 591 aa22.37■■□□□ 1.17
HMGA2-205ENST00000425208 CCDC163A0A0D9SF12 145 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 K7ERQ8 282 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 SMAD6O43541 496 aaKnown RBP22.36■■□□□ 1.17
HMGA2-205ENST00000425208 PRAMEF11O60813 436 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 SIN3BO75182 1162 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 PXNP49023 591 aaPredicted RBP22.36■■□□□ 1.17
HMGA2-205ENST00000425208 PEX5P50542 639 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 TCF15Q12870 199 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 TAZQ16635 292 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 HEATR6Q6AI08 1181 aaKnown RBP22.36■■□□□ 1.17
HMGA2-205ENST00000425208 TP53INP2Q8IXH6 220 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 PGBD3Q8N328 593 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 ATPAF2Q8N5M1 289 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 SHROOM3Q8TF72 1996 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 CASKIN2Q8WXE0 1202 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 PTPRN2Q92932 1015 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 HES6Q96HZ4 224 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 CCDC114Q96M63 670 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 IPO11Q9UI26 975 aaKnown RBP22.36■■□□□ 1.17
HMGA2-205ENST00000425208 ACTL7AQ9Y615 435 aa22.36■■□□□ 1.17
HMGA2-205ENST00000425208 H0Y858 1186 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 CD160O95971 181 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 GABRG2P18507 467 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 PTPN5P54829 565 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 COPS2P61201 443 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 DMWDQ09019 674 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 TFDP2Q14188 446 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 ELAVL3Q14576 367 aaKnown RBP22.35■■□□□ 1.17
HMGA2-205ENST00000425208 PPP2R5EQ16537 467 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 C9orf64Q5T6V5 341 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 KAZNQ674X7 775 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 LEKR1Q6ZMV7 388 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 Q6ZVU0 165 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 LONP2Q86WA8 852 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 PLD5Q8N7P1 536 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 ALG3Q92685 438 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 MRGPRX1Q96LB2 322 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 MKRN2Q9H000 416 aaKnown RBP22.35■■□□□ 1.17
HMGA2-205ENST00000425208 PDFQ9HBH1 243 aa22.35■■□□□ 1.17
HMGA2-205ENST00000425208 UBA2Q9UBT2 640 aaPredicted RBP22.35■■□□□ 1.17
HMGA2-205ENST00000425208 FCF1Q9Y324 198 aaKnown RBP22.35■■□□□ 1.17
HMGA2-205ENST00000425208 hCG_1818297A0A087WSY0 165 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 J3KR12 359 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 AXIN1O15169 862 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 VAV1P15498 845 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 NDUFV2P19404 249 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 CETN2P41208 172 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 FNTBP49356 437 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 COPAP53621 1224 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 DYNLT1P63172 113 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 GBE1Q04446 702 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 IL10RBQ08334 325 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 INO80DQ53TQ3 878 aaPredicted RBP22.34■■□□□ 1.17
HMGA2-205ENST00000425208 ARHGAP36Q6ZRI8 547 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 TMPRSS6Q8IU80 811 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 LRRC49Q8IUZ0 686 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 REXO1L1PQ8IX06 675 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms