RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SYAP1Q96A49 352 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-203ENST00000424270 CCDC127Q96BQ5 260 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 HVCN1Q96D96 273 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 CALML4Q96GE6 196 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 SLC45A3Q96JT2 553 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 DNAI2Q9GZS0 605 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 CDH19Q9H159 772 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 SMYD3Q9H7B4 428 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 CLIC5Q9NZA1 410 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 LUZP4Q9P127 313 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 SLCO3A1Q9UIG8 710 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 GPR34Q9UPC5 381 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 MAP4K5Q9Y4K4 846 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 CRYBG3Q68DQ2 2970 aa6.51□□□□□ -1.37
SDCBP-203ENST00000424270 CSMD1Q96PZ7 3565 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 MYH11P35749 1972 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 BSNQ9UPA5 3926 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 A0A1W2PQM1 296 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 HEATR9A2RTY3 570 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 VWA3AA6NCI4 1184 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 A6NCN8 305 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 LMO7DNF2Z398 122 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 YY2O15391 372 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 STX6O43752 255 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 GCATO75600 419 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 CTDNEP1O95476 244 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SNRPB2P08579 225 aaKnown RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 FAM163BP0C2L3 166 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 CCL4P13236 92 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 P4HA1P13674 534 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 FDPSP14324 419 aaKnown RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 VAV1P15498 845 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 GARTP22102 1010 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 CLCN1P35523 988 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 RECQLP46063 649 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SLC11A2P49281 568 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 STK19P49842 368 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SGSHP51688 502 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 PGDP52209 483 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 NDST1P52848 882 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 MYL6P60660 151 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 YWHAGP61981 247 aaKnown RBP eCLIP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SGCGQ13326 291 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 NR6A1Q15406 480 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 INPP5JQ15735 1006 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ZNF284Q2VY69 593 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ZNF699Q32M78 642 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 AMZ1Q400G9 498 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 NADK2Q4G0N4 442 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ZNF667Q5HYK9 610 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 AGBL4Q5VU57 503 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SEL1L3Q68CR1 1132 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 NEK5Q6P3R8 708 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ADGRD1Q6QNK2 874 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 KYAT3Q6YP21 454 aaKnown RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 MMS22LQ6ZRQ5 1243 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 PAQR9Q6ZVX9 377 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ABI3BPQ7Z7G0 1075 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SCD5Q86SK9 330 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SFR1Q86XK3 245 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 NLGN4XQ8N0W4 816 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 KDM1BQ8NB78 822 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 HJURPQ8NCD3 748 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 RCBTB1Q8NDN9 531 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ZMIZ2Q8NF64 920 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 NLGN4YQ8NFZ3 816 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 OR6C4Q8NGE1 309 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 PCDH19Q8TAB3 1148 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 KCNB2Q92953 911 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ART4Q93070 314 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 TTC17Q96AE7 1141 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 MYO19Q96H55 970 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 C8orf76Q96K31 380 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 MRGPRX3Q96LB0 322 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 EPAS1Q99814 870 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 CBWD1Q9BRT8 395 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 MMTAG2Q9BU76 263 aaKnown RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ASPSCR1Q9BZE9 553 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SEMA6CQ9H3T2 930 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 LATS2Q9NRM7 1088 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 SLC39A1Q9NY26 324 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 RABGEF1Q9UJ41 708 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 KIF3AQ9Y496 699 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 OAS3Q9Y6K5 1087 aaKnown RBP6.5□□□□□ -1.37
SDCBP-203ENST00000424270 PCNX1Q96RV3 2341 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 KIF26BQ2KJY2 2108 aa6.5□□□□□ -1.37
SDCBP-203ENST00000424270 ARID1BQ8NFD5 2236 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 GOLGA6L7A0A1B0GV03 622 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 POM121BA6NF01 834 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 SPTLC2O15270 562 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 LRCH4O75427 683 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 REC8O95072 547 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 PAK4O96013 591 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ALPIP09923 528 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 TSHRP16473 764 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 VARSP26640 1264 aaKnown RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 MAP4P27816 1152 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms