RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 ZMPSTE24O75844 475 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 IFNB1P01574 187 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 NNMTP40261 264 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 OPRD1P41143 372 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 GRIA2P42262 883 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 TNFRSF4P43489 277 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SOX9P48436 509 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 KDSRQ06136 332 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 HNRNPDQ14103 355 aaKnown RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SLC44A4Q53GD3 710 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 GLE1Q53GS7 698 aaKnown RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 INO80DQ53TQ3 878 aaPredicted RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 TTC27Q6P3X3 843 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 C4orf22Q6V702 233 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 PID1Q7Z2X4 250 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 ADIPOR2Q86V24 386 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 CASKIN2Q8WXE0 1202 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 MAML1Q92585 1016 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 VAT1Q99536 393 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 CIPCQ9C0C6 399 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 RBM22Q9NW64 420 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■■□ 20.5
POLR1B-205ENST00000424062 ELOVL2Q9NXB9 296 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SEPT3Q9UH03 358 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 VPS51Q9UID3 782 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 TRHDEQ9UKU6 1024 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 INTS6Q9UL03 887 aaKnown RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 DUSP12Q9UNI6 340 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SORCS3Q9UPU3 1222 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 PIAS3Q9Y6X2 628 aa12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SPTBN5Q9NRC6 3674 aaKnown RBP12.13□□□□□ -0.47
POLR1B-205ENST00000424062 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 KCNK1O00180 336 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 RNF103O00237 685 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 MAN2B1O00754 1011 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 GCATO75600 419 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 KAT7O95251 611 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 KRT14P02533 472 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 SRPRAP08240 638 aaKnown RBP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 VAV1P15498 845 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 GLDCP23378 1020 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 CTHP32929 405 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 PTGIRP43119 386 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 NUMBP49757 651 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 IFI35P80217 286 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 ARF5P84085 180 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 GRSF1Q12849 480 aaKnown RBP eCLIP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 EIF4HQ15056 248 aaKnown RBP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 P3H1Q32P28 736 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 FUT11Q495W5 492 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 TEX44Q53QW1 395 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 LINGO4Q6UY18 593 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 LEKR1Q6ZMV7 388 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 RNF135Q8IUD6 432 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 TERB1Q8NA31 727 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 SLCO2A1Q92959 643 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 CINPQ9BW66 212 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 PDFQ9HBH1 243 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 HEBP1Q9NRV9 189 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 KLHL8Q9P2G9 620 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-205ENST00000424062 ERVW-1Q9UQF0 538 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 CHD5Q8TDI0 1954 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 PRUNE2Q8WUY3 3088 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
POLR1B-205ENST00000424062 EYSQ5T1H1 3165 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 A0A0A0MRY4 1105 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 OPHN1O60890 802 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 DLDP09622 509 aaKnown RBP12.11□□□□□ -0.47
POLR1B-205ENST00000424062 DRD1P21728 446 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 PTPN3P26045 913 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ADCY8P40145 1251 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 MMP13P45452 471 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ITKQ08881 620 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 WASHC5Q12768 1159 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ZNF235Q14590 738 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 CYTH1Q15438 398 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ACCSLQ4AC99 568 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ANKRD20A2Q5SQ80 823 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ANKRD20A1Q5TYW2 823 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ANKRD20A3Q5VUR7 823 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ITPRIPL1Q6GPH6 555 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 UBALD2Q8IYN6 164 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 GJD3Q8N144 294 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 TEX26Q8N6G2 289 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 NOA1Q8NC60 698 aaKnown RBP12.11□□□□□ -0.47
POLR1B-205ENST00000424062 CYB5D2Q8WUJ1 264 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 LRRC45Q96CN5 670 aa12.11□□□□□ -0.47
POLR1B-205ENST00000424062 RTP4Q96DX8 246 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms