RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SERPINB5P36952 375 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 FDFT1P37268 417 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 KCNQ1P51787 676 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 IHHQ14623 411 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 C10orf120Q5SQS8 335 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 MAVSQ7Z434 540 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PSMG2Q969U7 264 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 ADAM12O43184 909 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 FGF3P11487 239 aaPredicted RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 HNRNPLP14866 589 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 MPSTP25325 297 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 CD86P42081 329 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 SEMG2Q02383 582 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 MPP3Q13368 585 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 TUSC3Q13454 348 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PDCD2Q16342 344 aaPredicted RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 CEP97Q8IW35 865 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 ST13P5Q8NFI4 369 aaPredicted RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 SOCS4Q8WXH5 440 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 NSL1Q96IY1 281 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PLCD4Q9BRC7 762 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 SPON2Q9BUD6 331 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 HBS1LQ9Y450 684 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 C9JVG2 144 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PLIN3O60664 434 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 AHSGP02765 367 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 GLDCP23378 1020 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 DNAJB2P25686 324 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 ACVRL1P37023 503 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 ACLYP53396 1101 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 NAGLUP54802 743 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 NIPAL4Q0D2K0 466 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 CTXN3Q4LDR2 81 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 RBM20Q5T481 1227 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PIK3R6Q5UE93 754 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 GBP7Q8N8V2 638 aaPredicted RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PDCD6IPQ8WUM4 868 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 AUTS2Q8WXX7 1259 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 KCTD13Q8WZ19 329 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 ALKBH8Q96BT7 664 aaKnown RBP12.14□□□□□ -0.47
PTPRN-204ENST00000423636 PHF21BQ96EK2 531 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 HMCESQ96FZ2 354 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 TBC1D13Q9NVG8 400 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 AK5Q9Y6K8 562 aa12.14□□□□□ -0.47
PTPRN-204ENST00000423636 GPR39O43194 453 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 AP2A1O95782 977 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 RALBP11234 206 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 TCN1P20061 433 aaPredicted RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 PGM1P36871 562 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 GLUD2P49448 558 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 MGAT3Q09327 533 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 PAFAH1B3Q15102 231 aaKnown RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 RCN1Q15293 331 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 TCHHL1Q5QJ38 904 aaPredicted RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 ZNF470Q6ECI4 717 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CCDC91Q7Z6B0 441 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 MFSD6LQ8IWD5 586 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
PTPRN-204ENST00000423636 ABI1Q8IZP0 508 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 RAET1EQ8TD07 263 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 IGSF8Q969P0 613 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 NUF2Q9BZD4 464 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 GIT1Q9Y2X7 761 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 SLC12A8A0AV02 714 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CFAP73A6NFT4 308 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 E9PAM4 449 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 SLC10A3P09131 477 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 OCRLQ01968 901 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 TAF10Q12962 218 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 GALNT3Q14435 633 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 TCTN1Q2MV58 587 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 SLC9B1Q4ZJI4 515 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 ACSBG2Q5FVE4 666 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 ARHGAP12Q8IWW6 846 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 THEM5Q8N1Q8 247 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 URGCPQ8TCY9 931 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 NXNL1Q96CM4 212 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 TEKT5Q96M29 485 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 GKN1Q9NS71 199 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 A8MX80 341 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 GSC2O15499 205 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CFLARO15519 480 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 PEX11AO75192 247 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 HSPA4LO95757 839 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CPA3P15088 417 aa12.13□□□□□ -0.47
PTPRN-204ENST00000423636 CRHR1P34998 444 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms