RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 RTP4Q96DX8 246 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 C11orf84Q9BUA3 381 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 NMRAL1Q9HBL8 299 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 FBXW11Q9UKB1 542 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 DCLK1O15075 740 aa13.58□□□□□ -0.23
MCF2L-213ENST00000421756 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.23
MCF2L-213ENST00000421756 METTL23Q86XA0 190 aa13.58□□□□□ -0.23
MCF2L-213ENST00000421756 ZNF280BQ86YH2 543 aa13.58□□□□□ -0.23
MCF2L-213ENST00000421756 SPATA2LQ8IUW3 424 aaPredicted RBP13.58□□□□□ -0.23
MCF2L-213ENST00000421756 CFAP52Q8N1V2 620 aa13.58□□□□□ -0.23
MCF2L-213ENST00000421756 FBXO41Q8TF61 875 aa13.58□□□□□ -0.23
MCF2L-213ENST00000421756 ZNF419Q96HQ0 510 aaPredicted RBP13.58□□□□□ -0.23
MCF2L-213ENST00000421756 SLC45A3Q96JT2 553 aa13.58□□□□□ -0.23
MCF2L-213ENST00000421756 GATA5Q9BWX5 397 aaPredicted RBP13.58□□□□□ -0.23
MCF2L-213ENST00000421756 SSU72Q9NP77 194 aaKnown RBP13.58□□□□□ -0.23
MCF2L-213ENST00000421756 SERPINE1P05121 402 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 CST9Q5W186 159 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 FRMD7Q6ZUT3 714 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 LMNTD2Q8IXW0 634 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 KBTBD2Q8IY47 623 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 LRRC39Q96DD0 335 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 KCTD3Q9Y597 815 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 PDCD6IPQ8WUM4 868 aaKnown RBP13.58□□□□□ -0.24
MCF2L-213ENST00000421756 PPP1R10Q96QC0 940 aaKnown RBP13.58□□□□□ -0.24
MCF2L-213ENST00000421756 SMIM14Q96QK8 99 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 SLC39A8Q9C0K1 460 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 IL1RL2Q9HB29 575 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 NMUR1Q9HB89 426 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 ZNF180Q9UJW8 692 aa13.58□□□□□ -0.24
MCF2L-213ENST00000421756 ABT1Q9ULW3 272 aaKnown RBP13.58□□□□□ -0.24
MCF2L-213ENST00000421756 RANBP2P49792 3224 aaKnown RBP13.58□□□□□ -0.24
MCF2L-213ENST00000421756 BRCA1P38398 1863 aaKnown RBP13.58□□□□□ -0.24
MCF2L-213ENST00000421756 A0A1W2PQH9 124 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 MBLAC1A4D2B0 266 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 MAP3K13O43283 966 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 GRIA4P48058 902 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 COPAP53621 1224 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 SLC5A3P53794 718 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 DPYSQ14117 519 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 RNF220Q5VTB9 566 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ANKRD23Q86SG2 305 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 TMPRSS6Q8IU80 811 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 SMARCD1Q96GM5 515 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 PNPLA8Q9NP80 782 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 XPR1Q9UBH6 696 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 FETUBQ9UGM5 382 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 DCDC2Q9UHG0 476 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 RBM47A0AV96 593 aaKnown RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 MAP3K7O43318 606 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ZBTB14O43829 449 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 AP2A1O95782 977 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 GSRP00390 522 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 AHSGP02765 367 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ASGR1P07306 291 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 GNAT1P11488 350 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 KCNE1P15382 129 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ARL13AQ5H913 290 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ANO7Q6IWH7 933 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 TOP6BLQ8N6T0 577 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 TRPV1Q8NER1 839 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 C7orf26Q96N11 449 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 LENG8Q96PV6 779 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 GORASP1Q9BQQ3 440 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ACE2Q9BYF1 805 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 CTGFP29279 349 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 MAGEA3P43357 314 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 FLT3LGP49771 235 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 NIPAL4Q0D2K0 466 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ASPHQ12797 758 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 PSMD5Q16401 504 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 SNX32Q86XE0 403 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 SORT1Q99523 831 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 SPON2Q9BUD6 331 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 FRMD8Q9BZ67 464 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-213ENST00000421756 DERAQ9Y315 318 aa13.57□□□□□ -0.24
MCF2L-213ENST00000421756 ZCWPW2A0A1B0GU75 182 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 J3KR12 359 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 CNTN5O94779 1100 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 GNAZP19086 355 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 CDH13P55290 713 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 SLC34A1Q06495 639 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 CRHR2Q13324 411 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
MCF2L-213ENST00000421756 RBM20Q5T481 1227 aaKnown RBP13.56□□□□□ -0.24
MCF2L-213ENST00000421756 CEP97Q8IW35 865 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 ARHGAP24Q8N264 748 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 MAGEC3Q8TD91 643 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 GIPC2Q8TF65 315 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 RBBP8Q99708 897 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 B4GALT3O60512 393 aa13.56□□□□□ -0.24
MCF2L-213ENST00000421756 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
MCF2L-213ENST00000421756 PCSK1P29120 753 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms