RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 SLC7A14Q8TBB6 771 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 MFSD3Q96ES6 412 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 C11orf84Q9BUA3 381 aaPredicted RBP21.63■■□□□ 1.05
USP48-205ENST00000421625 TRPV6Q9H1D0 765 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 TMEM165Q9HC07 324 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 ADAMTS5Q9UNA0 930 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 MYRFQ9Y2G1 1151 aa21.63■■□□□ 1.05
USP48-205ENST00000421625 KCNU1A8MYU2 1149 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 HACD1B0YJ81 288 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 GOLGA8TH3BQL2 631 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 CLCN3P51790 818 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 MBTD1Q05BQ5 628 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 RFTN1Q14699 578 aaPredicted RBP21.62■■□□□ 1.05
USP48-205ENST00000421625 LIPMQ5VYY2 423 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 KRT80Q6KB66 452 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 LSMEM2Q8N112 164 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 TMEM151AQ8N4L1 468 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 RANBP9Q96S59 729 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 PPP1R16BQ96T49 567 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 CIB1Q99828 191 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 SLC39A10Q9ULF5 831 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 SNX13Q9Y5W8 968 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 ZCWPW2A0A1B0GU75 182 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 SLC22A2O15244 555 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 FAM163BP0C2L3 166 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 DPYSQ14117 519 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 FAM131BQ86XD5 332 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 SLC35F5Q8WV83 523 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 OSBPL11Q9BXB4 747 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 TNFSF13BQ9Y275 285 aa21.62■■□□□ 1.05
USP48-205ENST00000421625 ZNF638Q14966 1978 aaKnown RBP21.62■■□□□ 1.05
USP48-205ENST00000421625 BOLA2-SMG1P6H3BVE0 249 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 ARSAP15289 507 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PTPN9P43378 593 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PHKA2P46019 1235 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 RALGDSQ12967 914 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 LY6KQ17RY6 165 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 ZYG11AQ6WRX3 759 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 GFM2Q969S9 779 aaKnown RBP21.61■■□□□ 1.05
USP48-205ENST00000421625 ASB9Q96DX5 294 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 RMND5BQ96G75 393 aaPredicted RBP21.61■■□□□ 1.05
USP48-205ENST00000421625 LRRC40Q9H9A6 602 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 EBF1Q9UH73 591 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PCDHGA7Q9Y5G6 932 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 E7ENX8 843 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PHGDHO43175 533 aaKnown RBP21.61■■□□□ 1.05
USP48-205ENST00000421625 COQ9O75208 318 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PDGFRBP09619 1106 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 IFRD2Q12894 506 aaPredicted RBP21.61■■□□□ 1.05
USP48-205ENST00000421625 EML3Q32P44 896 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 SLC10A6Q3KNW5 377 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 SEPT1Q8WYJ6 367 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 CENPIQ92674 756 aaPredicted RBP21.61■■□□□ 1.05
USP48-205ENST00000421625 SLCO4A1Q96BD0 722 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 MRPL45Q9BRJ2 306 aaKnown RBP21.61■■□□□ 1.05
USP48-205ENST00000421625 NME7Q9Y5B8 376 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 KCNK1O00180 336 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PSME3P61289 254 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PRKAA1Q13131 559 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 ITPRIPL1Q6GPH6 555 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 CNTD1Q8N815 330 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 PPP1R14BQ96C90 147 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 CPB2Q96IY4 423 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 VPS39Q96JC1 886 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 SCYL1Q96KG9 808 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 BIRC8Q96P09 236 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 ANLNQ9NQW6 1124 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 FAIMQ9NVQ4 179 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 GTF2IRD1Q9UHL9 959 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 ZNF711Q9Y462 761 aa21.61■■□□□ 1.05
USP48-205ENST00000421625 IGKV6-21A0A0C4DH24 114 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 C8BP07358 591 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 SETSIPP0DME0 302 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 AVPR1AP37288 418 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 ARL4AP40617 200 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 MAGEA10P43363 369 aaPredicted RBP21.6■■□□□ 1.05
USP48-205ENST00000421625 MPP3Q13368 585 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 C16orf72Q14CZ0 275 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 PID1Q7Z2X4 250 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 FIBCD1Q8N539 461 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 SMYD1Q8NB12 490 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 PRDM12Q9H4Q4 367 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 BLOC1S6Q9UL45 172 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 KIAA1257Q9ULG3 409 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 VANGL2Q9ULK5 521 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 FOXD2O60548 495 aaPredicted RBP21.6■■□□□ 1.05
USP48-205ENST00000421625 SUPT3HO75486 399 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 CTBSQ01459 385 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 TRIM25Q14258 630 aaKnown RBP21.6■■□□□ 1.05
USP48-205ENST00000421625 TMEM132DQ14C87 1099 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 GLRA4Q5JXX5 417 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 HMBOX1Q6NT76 420 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 MAMDC4Q6UXC1 1216 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 CYP2R1Q6VVX0 501 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 LRRC43Q8N309 656 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 C1QTNF1Q9BXJ1 281 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 IL22Q9GZX6 179 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 IARS2Q9NSE4 1012 aaKnown RBP21.6■■□□□ 1.05
USP48-205ENST00000421625 PNPLA3Q9NST1 481 aa21.6■■□□□ 1.05
USP48-205ENST00000421625 HACL1Q9UJ83 578 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms