RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 INO80DQ53TQ3 878 aaPredicted RBP21.97■■□□□ 1.11
ABCF3-202ENST00000421340 MARC1Q5VT66 337 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 WDR93Q6P2C0 686 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 METTL3Q86U44 580 aaKnown RBP21.97■■□□□ 1.11
ABCF3-202ENST00000421340 ZNF567Q8N184 647 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 WFIKKN2Q8TEU8 576 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 ABCB8Q9NUT2 735 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 HAUS2Q9NVX0 235 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 SEPT10Q9P0V9 454 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 WHRNQ9P202 907 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.97■■□□□ 1.11
ABCF3-202ENST00000421340 ASIC3Q9UHC3 531 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 GGA2Q9UJY4 613 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 V9GYY5 206 aaPredicted RBP21.97■■□□□ 1.11
ABCF3-202ENST00000421340 DOCK8Q8NF50 2099 aa21.97■■□□□ 1.11
ABCF3-202ENST00000421340 OTOL1A6NHN0 477 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 ZSCAN5DPP0CG00 497 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 TNFRSF8P28908 595 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 GPS1Q13098 491 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 CUL1Q13616 776 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 LBRQ14739 615 aaKnown RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 TRIP13Q15645 432 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PARP6Q2NL67 630 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PREPLQ4J6C6 727 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PITRM1Q5JRX3 1037 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 ITPRIPL1Q6GPH6 555 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 ASTLQ6HA08 431 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 RETSATQ6NUM9 610 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 ARHGEF18Q6ZSZ5 1173 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PID1Q7Z2X4 250 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PCGF5Q86SE9 256 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 APCDD1Q8J025 514 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 AHI1Q8N157 1196 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 ST13P5Q8NFI4 369 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 MAFAQ8NHW3 353 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 CCDC110Q8TBZ0 833 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 TTC17Q96AE7 1141 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 SNF8Q96H20 258 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PPP1R2P1Q96PQ5 205 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 BRD9Q9H8M2 597 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 KCNK12Q9HB15 430 aa21.96■■□□□ 1.11
ABCF3-202ENST00000421340 UBA2Q9UBT2 640 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 INTS6Q9UL03 887 aaKnown RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 KIF26AQ9ULI4 1882 aaPredicted RBP21.96■■□□□ 1.11
ABCF3-202ENST00000421340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 SMAPO00193 183 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 CBX4O00257 560 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 TULP3O75386 442 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 FDFT1P37268 417 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 DGKGP49619 791 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 VASPP50552 380 aaPredicted RBP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 ARF5P84085 180 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 ZBTB17Q13105 803 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 BBS5Q8N3I7 341 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 SLC44A3Q8N4M1 653 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 CNTD1Q8N815 330 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 DNAJC17Q9NVM6 304 aaKnown RBP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 RBM22Q9NW64 420 aaKnown RBP eCLIP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 KLHL8Q9P2G9 620 aaPredicted RBP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 DEC1Q9P2X7 70 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 LIMD1Q9UGP4 676 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 VPS51Q9UID3 782 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 RAB21Q9UL25 225 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 TPX2Q9ULW0 747 aaKnown RBP21.95■■□□□ 1.1
ABCF3-202ENST00000421340 ATP8A1Q9Y2Q0 1164 aa21.95■■□□□ 1.1
ABCF3-202ENST00000421340 TIMM44O43615 452 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 GJA4P35212 333 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 HSPA9P38646 679 aaKnown RBP21.94■■□□□ 1.1
ABCF3-202ENST00000421340 MMP13P45452 471 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 RPL21P46778 160 aaKnown RBP21.94■■□□□ 1.1
ABCF3-202ENST00000421340 CAV1Q03135 178 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 SLC10A7Q0GE19 358 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 PRUNE1Q86TP1 453 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 NAT16Q8N8M0 369 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 PARD6BQ9BYG5 372 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 GTSE1Q9NYZ3 720 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 SEPT3Q9UH03 358 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 SNX24Q9Y343 169 aa21.94■■□□□ 1.1
ABCF3-202ENST00000421340 LOC730098B7Z3J9 87 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 DNALI1O14645 258 aaPredicted RBP21.93■■□□□ 1.1
ABCF3-202ENST00000421340 ZBTB24O43167 697 aaPredicted RBP21.93■■□□□ 1.1
ABCF3-202ENST00000421340 SEC31AO94979 1220 aaKnown RBP21.93■■□□□ 1.1
ABCF3-202ENST00000421340 CD160O95971 181 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 CES1P23141 567 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 GLDCP23378 1020 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 SP100P23497 879 aaPredicted RBP21.93■■□□□ 1.1
ABCF3-202ENST00000421340 MAGEA6P43360 314 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 NRLP54845 237 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 CALCOCO2Q13137 446 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 NAA30Q147X3 362 aaPredicted RBP21.93■■□□□ 1.1
ABCF3-202ENST00000421340 AAK1Q2M2I8 961 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 FUT11Q495W5 492 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 GRAMD4Q6IC98 578 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 ADIPOR2Q86V24 386 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 CSGALNACT1Q8TDX6 532 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 DNASE1L2Q92874 299 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 PSKH2Q96QS6 385 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 FCRL5Q96RD9 977 aa21.93■■□□□ 1.1
ABCF3-202ENST00000421340 PNKPQ96T60 521 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms