RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 WDCPQ9H6R7 721 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 APPL1Q9UKG1 709 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 PCDHB12Q9Y5F1 795 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 CDY2AQ9Y6F7 541 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
LIMK1-202ENST00000418310 TTC24A2A3L6 582 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 AURKAO14965 403 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 TRPA1O75762 1119 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CD4P01730 458 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CXCR3P49682 368 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 DPYSQ14117 519 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 GK3PQ14409 553 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 PAOXQ6QHF9 649 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 TMC7Q7Z402 723 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 ZNF354CQ86Y25 554 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 APBB2Q92870 758 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 ILKAPQ9H0C8 392 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 MSI1O43347 362 aaKnown RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FGFR3P22607 806 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 BTKQ06187 659 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FSCBQ5H9T9 825 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 TMCO4Q5TGY1 634 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 ESRP1Q6NXG1 681 aaKnown RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FBXW8Q8N3Y1 598 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 NXNL1Q96CM4 212 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 NMD3Q96D46 503 aaKnown RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 SMOQ99835 787 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 DNAJC28Q9NX36 388 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 ASB3Q9Y575 518 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 SF3B1O75533 1304 aaKnown RBP eCLIP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CCL15-CCL14A0A0B4J2E2 113 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 C9IYK1 514 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CRABP2P29373 138 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 GSTT1P30711 240 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 GJA9P57773 515 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 SNAPC2Q13487 334 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FLOT2Q14254 428 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CCL15Q16663 113 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 SEL1L3Q68CR1 1132 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 IYDQ6PHW0 289 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 LDB1Q86U70 411 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 SPATA24Q86W54 205 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FSTL5Q8N475 847 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-202ENST00000418310 PPP2R3CQ969Q6 453 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 FICDQ9BVA6 458 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 CLIC5Q9NZA1 410 aa12.1□□□□□ -0.47
LIMK1-202ENST00000418310 BDNFP23560 247 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 HARS2P49590 506 aaKnown RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 CLCNKBP51801 687 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 NME5P56597 212 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 CCDC153Q494R4 210 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 EPGNQ6UW88 154 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 SATL1Q86VE3 508 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 PDSS2Q86YH6 399 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 SREK1Q8WXA9 508 aaKnown RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ELMO2Q96JJ3 720 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 C1orf21Q9H246 121 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 SEMA6AQ9H2E6 1030 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ADA2Q9NZK5 511 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 IGSF9Q9P2J2 1179 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 KCNH4Q9UQ05 1017 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 MTF2Q9Y483 593 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 DTNAQ9Y4J8 743 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 BTBD19C9JJ37 291 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 PTGESO14684 152 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 VCLP18206 1134 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 GRIA2P42262 883 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ITKQ08881 620 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 BIRC2Q13490 618 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 CNGA3Q16281 694 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 DUSP28Q4G0W2 176 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 GK5Q6ZS86 529 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 FAM35AQ86V20 835 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 CEP97Q8IW35 865 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ICA1LQ8NDH6 482 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 SCAMP5Q8TAC9 235 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 PHF21BQ96EK2 531 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 HNRNPABQ99729 332 aaKnown RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 NAT9Q9BTE0 207 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 COLEC11Q9BWP8 271 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 TTC3P53804 2025 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 TRIP12Q14669 1992 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ATP6AP2A0A1C7CYW4 349 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 PEX1O43933 1283 aa12.09□□□□□ -0.47
LIMK1-202ENST00000418310 CCNT2O60583 730 aaKnown RBP12.09□□□□□ -0.47
LIMK1-202ENST00000418310 ATP6AP2O75787 350 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms