RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 NDUFV2P19404 249 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CTNNA2P26232 953 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CTNNA1P35221 906 aaKnown RBP17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 GJC1P36383 396 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 NBL1P41271 181 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZBTB16Q05516 673 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MMRN1Q13201 1228 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 TMPRSS6Q8IU80 811 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 NPWQ8N729 165 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ATP11CQ8NB49 1132 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ATRIPQ8WXE1 791 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MKRN2Q9H000 416 aaKnown RBP17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 RSPH9Q9H1X1 276 aaPredicted RBP17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 GOLPH3Q9H4A6 298 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 TRIM10Q9UDY6 481 aa17.89■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MACROD2A1Z1Q3 448 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CCDC66A2RUB6 948 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 LRRD1A4D1F6 860 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ALOX15BO15296 676 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PRAMEF11O60813 436 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 SIN3BO75182 1162 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZNF217O75362 1048 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZNF821O75541 412 aaPredicted RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PAPOLAP51003 745 aaKnown RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 BYSLQ13895 437 aaKnown RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ELAVL3Q14576 367 aaKnown RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 USP39Q53GS9 565 aaKnown RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZFYVE27Q5T4F4 411 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 NT5DC3Q86UY8 548 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 RCOR2Q8IZ40 523 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PCDH20Q8N6Y1 951 aaKnown RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PQLC3Q8N755 202 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZNF366Q8N895 744 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 HMGB4Q8WW32 186 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ATOH1Q92858 354 aaPredicted RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CELF6Q96J87 481 aaKnown RBP17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 FAM129BQ96TA1 746 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PDFQ9HBH1 243 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 SCML1Q9UN30 329 aa17.88■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 K7ERQ8 282 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MCF2LO15068 1137 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PALMO75781 387 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZRANB2O95218 330 aaKnown RBP eCLIP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 IGLV3-19P01714 112 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 KRT1P04264 644 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZFXP17010 805 aaPredicted RBP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PXNP49023 591 aaPredicted RBP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 NUMBP49757 651 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PEX5P50542 639 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 IL10RBQ08334 325 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 RFTN1Q14699 578 aaPredicted RBP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ACCSLQ4AC99 568 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ODF2Q5BJF6 829 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 NCBP2-AS2Q69YL0 99 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 HEATR6Q6AI08 1181 aaKnown RBP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 SLC9A4Q6AI14 798 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 LINGO4Q6UY18 593 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 C11orf74Q86VG3 221 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 GAB3Q8WWW8 586 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PRCCQ92733 491 aaPredicted RBP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 SIPA1Q96FS4 1042 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CCDC114Q96M63 670 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZNF599Q96NL3 588 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ITM2CQ9NQX7 267 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 KLHL11Q9NVR0 708 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 BCCIPQ9P287 314 aaKnown RBP eCLIP17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 AMFRQ9UKV5 643 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PPP2R2CQ9Y2T4 447 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 FANCMQ8IYD8 2048 aa17.87■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MIF4GDA9UHW6 222 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PROB1E7EW31 1015 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 HRO43593 1189 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 RNASEH1O60930 286 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PTMAP06454 111 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 P2RY2P41231 377 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CDKN2BP42772 138 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 COPS2P61201 443 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 RPS14P62263 151 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 CCDC173Q0VFZ6 552 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MAP7D1Q3KQU3 841 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 TMCO4Q5TGY1 634 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 ZNF776Q68DI1 518 aaPredicted RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 C22orf39Q6P5X5 142 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MFSD7Q6UXD7 560 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 DSG4Q86SJ6 1040 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 PGBD3Q8N328 593 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 OR2A12Q8NGT7 310 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 KRT35Q92764 455 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 RBM41Q96IZ5 413 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MAK16Q9BXY0 300 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 KCNF1Q9H3M0 494 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MTG2Q9H4K7 406 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 USP36Q9P275 1121 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 IPO11Q9UI26 975 aaKnown RBP17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 GUCA1BQ9UMX6 200 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 EFR3BQ9Y2G0 817 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 MFHAS1Q9Y4C4 1052 aa17.86■□□□□ 0.45
COMMD3-BMI1-201ENST00000417470 FARP1Q9Y4F1 1045 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms