RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ATP13A1Q9HD20 1204 aa17.21■□□□□ 0.35
COL6A2-205ENST00000413758 HS3ST2Q9Y278 367 aa17.21■□□□□ 0.35
COL6A2-205ENST00000413758 BTBD3Q9Y2F9 522 aa17.21■□□□□ 0.35
COL6A2-205ENST00000413758 MSRB2Q9Y3D2 182 aa17.21■□□□□ 0.35
COL6A2-205ENST00000413758 TMEM131Q92545 1883 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 IGLV3-10A0A075B6K4 115 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 ILVBLA1L0T0 632 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 PLRG1O43660 514 aaKnown RBP17.2■□□□□ 0.34
COL6A2-205ENST00000413758 CBFA2T3O75081 653 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 KRT3P12035 628 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 CHRNA3P32297 505 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 GRK6P43250 576 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 TYRO3Q06418 890 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 CCDC15Q0P6D6 951 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 CLEC16AQ2KHT3 1053 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 CCDC14Q49A88 953 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 RAB6CQ53S08 254 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 RETSATQ6NUM9 610 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 RAB44Q7Z6P3 723 aaPredicted RBP17.2■□□□□ 0.34
COL6A2-205ENST00000413758 GRIN3AQ8TCU5 1115 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 PCDHB18PQ96TA0 734 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 NAT10Q9H0A0 1025 aaKnown RBP17.2■□□□□ 0.34
COL6A2-205ENST00000413758 RAB6CQ9H0N0 254 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 KDM4CQ9H3R0 1056 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 GDF3Q9NR23 364 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 OR12D3Q9UGF7 316 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 CACNA1BQ00975 2339 aa17.2■□□□□ 0.34
COL6A2-205ENST00000413758 ANKRD62A6NC57 917 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 TMEM8BA6NDV4 472 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 WNT9AO14904 365 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 SMAD6O43541 496 aaKnown RBP17.19■□□□□ 0.34
COL6A2-205ENST00000413758 PRNPP04156 253 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 WNT1P04628 370 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 CALB1P05937 261 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ITGAVP06756 1048 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 GLDCP23378 1020 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ADRA1BP35368 520 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 CLCN6P51797 869 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 GNA12Q03113 381 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 AGBL4Q5VU57 503 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 NAPEPLDQ6IQ20 393 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 C22orf39Q6P5X5 142 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ZNF783Q6ZMS7 281 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 GLRX5Q86SX6 157 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 SLCO6A1Q86UG4 719 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 OR2A12Q8NGT7 310 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 FAM172AQ8WUF8 416 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ADAMTS14Q8WXS8 1223 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ZCCHC14Q8WYQ9 949 aaKnown RBP17.19■□□□□ 0.34
COL6A2-205ENST00000413758 GATA6Q92908 595 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ELF4Q99607 663 aaPredicted RBP17.19■□□□□ 0.34
COL6A2-205ENST00000413758 PPARGC1AQ9UBK2 798 aaKnown RBP17.19■□□□□ 0.34
COL6A2-205ENST00000413758 ZMIZ1Q9ULJ6 1067 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 EPG5Q9HCE0 2579 aa17.19■□□□□ 0.34
COL6A2-205ENST00000413758 A0A1B0GTQ1 180 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 C2CD4BA6NLJ0 364 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 TLR4O00206 839 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 PCDHGA12O60330 932 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 RNGTTO60942 597 aaKnown RBP17.18■□□□□ 0.34
COL6A2-205ENST00000413758 ATXN1LP0C7T5 689 aaKnown RBP17.18■□□□□ 0.34
COL6A2-205ENST00000413758 CCDC172P0C7W6 258 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 UNGP13051 313 aaPredicted RBP17.18■□□□□ 0.34
COL6A2-205ENST00000413758 GPD1P21695 349 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 PTPN9P43378 593 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 STAT4Q14765 748 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 SETMARQ53H47 684 aaPredicted RBP17.18■□□□□ 0.34
COL6A2-205ENST00000413758 ARSIQ5FYB1 569 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 DBX2Q6ZNG2 339 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 BNIPLQ7Z465 357 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 ZNF354CQ86Y25 554 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 GATAD2AQ86YP4 633 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 RYBPQ8N488 228 aaPredicted RBP17.18■□□□□ 0.34
COL6A2-205ENST00000413758 CHST14Q8NCH0 376 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 TMIEQ8NEW7 156 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 ERGIC2Q96RQ1 377 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 AGPAT1Q99943 283 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 FTSJ1Q9UET6 329 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 IL36AQ9UHA7 158 aa17.18■□□□□ 0.34
COL6A2-205ENST00000413758 A0A1W2PR77 199 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 LATO43561 262 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 PCDH8O95206 1070 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 CTSLP07711 333 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 ATP1A3P13637 1013 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 FERP16591 822 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 RFC1P35251 1148 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-205ENST00000413758 NUDT1P36639 197 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 ETFBP38117 255 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 ARRB1P49407 418 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-205ENST00000413758 SLC20A2Q08357 652 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 NCAPHQ15003 741 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 SCYL2Q6P3W7 929 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 STRADAQ7RTN6 431 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 TRIM69Q86WT6 500 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 PHF13Q86YI8 300 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-205ENST00000413758 KLK6Q92876 244 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 ARRDC3Q96B67 414 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 TBC1D31Q96DN5 1066 aa17.17■□□□□ 0.34
COL6A2-205ENST00000413758 PPP1R16AQ96I34 528 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms