RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	PRAMEF11	O60813	436 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	ZMPSTE24	O75844	475 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	HOXB2	P14652	356 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	IL12RB1	P42701	662 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	WAS	P42768	502 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	NR2C2	P49116	596 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	STK19	P49842	368 aa	Predicted RBP	13.43	□□□□□ -0.26
SF1-206	ENST00000413725	SERPINH1	P50454	418 aa	Known RBP	13.43	□□□□□ -0.26
SF1-206	ENST00000413725	CCR3	P51677	355 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	GNG11	P61952	73 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	ARF5	P84085	180 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	GBE1	Q04446	702 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	GALNT2	Q10471	571 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	MTAP	Q13126	283 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	ENPP2	Q13822	863 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	GAS6	Q14393	721 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	LLGL1	Q15334	1064 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	ACCSL	Q4AC99	568 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	DCAF12L1	Q5VU92	463 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	PKN3	Q6P5Z2	889 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	LINGO4	Q6UY18	593 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	BBS12	Q6ZW61	710 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	SYT13	Q7L8C5	426 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	FANCM	Q8IYD8	2048 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	SH2D3C	Q8N5H7	860 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	NETO2	Q8NC67	525 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	NSMCE1	Q8WV22	266 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	CASKIN2	Q8WXE0	1202 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	P3H4	Q92791	437 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	MRGPRX3	Q96LB0	322 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	ACOX2	Q99424	681 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	GABRG3	Q99928	467 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	HEMGN	Q9BXL5	484 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	TLR10	Q9BXR5	811 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	TMEM245	Q9H330	911 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	UBA2	Q9UBT2	640 aa	Predicted RBP	13.43	□□□□□ -0.26
SF1-206	ENST00000413725	SUN2	Q9UH99	717 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	IPO11	Q9UI26	975 aa	Known RBP	13.43	□□□□□ -0.26
SF1-206	ENST00000413725	EDDM13	A0A1B0GTR0	161 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	SGK1	O00141	431 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	ENC1	O14682	589 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	PPP1R12A	O14974	1030 aa	Predicted RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	ZBTB24	O43167	697 aa	Predicted RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	ATP9B	O43861	1147 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	SYNCRIP	O60506	623 aa	Known RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	ADAM23	O75077	832 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	EPHX1	P07099	455 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	SRC	P12931	536 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	PRKCH	P24723	683 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	AVPR2	P30518	371 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	GARS	P41250	739 aa	Known RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	CXCL12	P48061	93 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	IL10RB	Q08334	325 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	PDK1	Q15118	436 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	INO80D	Q53TQ3	878 aa	Predicted RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	TIGD7	Q6NT04	549 aa	Predicted RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	AADACL2	Q6P093	401 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	MAMSTR	Q6ZN01	415 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	TP53INP2	Q8IXH6	220 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	HDAC11	Q96DB2	347 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	MYO19	Q96H55	970 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	CCDC114	Q96M63	670 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	POLM	Q9NP87	494 aa	Predicted RBP	13.42	□□□□□ -0.26
SF1-206	ENST00000413725	DTL	Q9NZJ0	730 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	SLCO3A1	Q9UIG8	710 aa		13.42	□□□□□ -0.26
SF1-206	ENST00000413725	TTC34	A8MYJ7	566 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	WASH3P	C4AMC7	463 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725		J3KR12	359 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	APOC4-APOC2	K7ER74	178 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	LAMTOR5	O43504	91 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	MAP3K6	O95382	1288 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	MT-CO1	P00395	513 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	APOC2	P02655	101 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	HLA-E	P13747	358 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	DGKE	P52429	567 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	SLC10A2	Q12908	348 aa	Predicted RBP	13.41	□□□□□ -0.26
SF1-206	ENST00000413725	RFTN1	Q14699	578 aa	Predicted RBP	13.41	□□□□□ -0.26
SF1-206	ENST00000413725	DLG2	Q15700	870 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	CRY1	Q16526	586 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.41	□□□□□ -0.26
SF1-206	ENST00000413725	TMCO4	Q5TGY1	634 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	C22orf39	Q6P5X5	142 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	NPNT	Q6UXI9	565 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	ARHGAP36	Q6ZRI8	547 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	BBS5	Q8N3I7	341 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	PCDH20	Q8N6Y1	951 aa	Known RBP	13.41	□□□□□ -0.26
SF1-206	ENST00000413725	ZNF366	Q8N895	744 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	DTWD2	Q8NBA8	298 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	TTC13	Q8NBP0	860 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	CCNY	Q8ND76	341 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	ZNF599	Q96NL3	588 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	CEP44	Q9C0F1	390 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	BRD8	Q9H0E9	1235 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	FBRS	Q9HAH7	460 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	PDF	Q9HBH1	243 aa		13.41	□□□□□ -0.26
SF1-206	ENST00000413725	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.41	□□□□□ -0.26
SF1-206	ENST00000413725	NUMA1	Q14980	2115 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	TARSL2	A2RTX5	802 aa	Known RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725		K7ERQ8	282 aa		13.4	□□□□□ -0.26

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