RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CD160O95971 181 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 AOC1P19801 751 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 NNMTP40261 264 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 MAGEA9P43362 315 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 STK19P49842 368 aaPredicted RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 SERPINH1P50454 418 aaKnown RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 CLCN6P51797 869 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 ST8SIA6P61647 398 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 OTUD4Q01804 1114 aaKnown RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 ZNF33AQ06730 810 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 PPIDQ08752 370 aaKnown RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 PDK1Q15118 436 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 NOMO1Q15155 1222 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 C2orf27AQ580R0 203 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 TIGD7Q6NT04 549 aaPredicted RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 BMP8AQ7Z5Y6 402 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 METTL3Q86U44 580 aaKnown RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 SH2D3CQ8N5H7 860 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 IL17RCQ8NAC3 791 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 RPLP0P6Q8NHW5 317 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 ACTL9Q8TC94 416 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 COG1Q8WTW3 980 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 MAIP1Q8WWC4 291 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 CASKIN2Q8WXE0 1202 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 FATE1Q969F0 183 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 HAUS1Q96CS2 278 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 RPL10LQ96L21 214 aaKnown RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 ZNF599Q96NL3 588 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 IER2Q9BTL4 223 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 CHRDQ9H2X0 955 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 SAE1Q9UBE0 346 aaPredicted RBP16.96■□□□□ 0.31
SUMO1-208ENST00000409627 SAR1BQ9Y6B6 198 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 ATG2BQ96BY7 2078 aa16.96■□□□□ 0.31
SUMO1-208ENST00000409627 TRIOO75962 3097 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 TCRBV7S2A1N4TA0A589 114 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 CHURC1-FNTBB4DL54 471 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 ATP9BO43861 1147 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 FGGP02679 453 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 SRCP12931 536 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 CCNCP24863 283 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 IL12RB1P42701 662 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 CLCN5P51795 746 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 XRCC4Q13426 336 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 FNDC3BQ53EP0 1204 aaKnown RBP16.95■□□□□ 0.3
SUMO1-208ENST00000409627 INO80DQ53TQ3 878 aaPredicted RBP16.95■□□□□ 0.3
SUMO1-208ENST00000409627 LINGO4Q6UY18 593 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 Q6ZS52 159 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 CHPFQ8IZ52 775 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 CCDC33Q8N5R6 958 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 ACTRT1Q8TDG2 376 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 ACOX2Q99424 681 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 GABRG3Q99928 467 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 TMEM245Q9H330 911 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 UBA2Q9UBT2 640 aaPredicted RBP16.95■□□□□ 0.3
SUMO1-208ENST00000409627 STON1Q9Y6Q2 735 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 TTC28Q96AY4 2481 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 VCANP13611 3396 aa16.95■□□□□ 0.3
SUMO1-208ENST00000409627 HACD1B0YJ81 288 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 PGRMC1O00264 195 aaKnown RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 KLF8O95600 359 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 PEX11BO96011 259 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 MT-CO1P00395 513 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 NTSR1P30989 418 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 RFTN1Q14699 578 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 PRKD1Q15139 912 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 SIX1Q15475 284 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 LONRF2Q1L5Z9 754 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 TMCO4Q5TGY1 634 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 SDE2Q6IQ49 451 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 SERPINA13PQ6UXR4 307 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 CCDC13Q8IYE1 715 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 ATP11CQ8NB49 1132 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 CCNYQ8ND76 341 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 NAP1L3Q99457 506 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 LGMNQ99538 433 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 FRMD8P1Q9BZ68 369 aaPredicted RBP16.94■□□□□ 0.3
SUMO1-208ENST00000409627 CEP44Q9C0F1 390 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 ZDHHC4Q9NPG8 344 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 CACNA2D2Q9NY47 1150 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 DLGAP2Q9P1A6 1054 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 SLCO3A1Q9UIG8 710 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 SLC8A2Q9UPR5 921 aa16.94■□□□□ 0.3
SUMO1-208ENST00000409627 K7ERQ8 282 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 MCF2LO15068 1137 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 ZNF185O15231 689 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 MATN3O15232 486 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 ATG13O75143 517 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 DCNP07585 359 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 PRKCHP24723 683 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 GAS6Q14393 721 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 HNRNPA1L2Q32P51 320 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 EOGTQ5NDL2 527 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 C22orf39Q6P5X5 142 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 PKN3Q6P5Z2 889 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 LEKR1Q6ZMV7 388 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 ZC3H18Q86VM9 953 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 TXNDC5Q8NBS9 432 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 FRS2Q8WU20 508 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms