RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ADCK5Q3MIX3 580 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 ANKRD45Q5TZF3 282 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 FBXL14Q8N1E6 418 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 SCAIQ8N9R8 606 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 KDM1BQ8NB78 822 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 GABPB2Q8TAK5 448 aaPredicted RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 FAR1Q8WVX9 515 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 THOC3Q96J01 351 aaKnown RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 FRG2BQ96QU4 278 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 DHDHQ9UQ10 334 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 STMND1H3BQB6 276 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 SMAD6O43541 496 aaKnown RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 DDAH2O95865 285 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 UNGP13051 313 aaPredicted RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 PRKCHP24723 683 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 CCKARP32238 428 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 SKIV2L2P42285 1042 aaKnown RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 CLCNKBP51801 687 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 AP5B1Q2VPB7 878 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 TMEM268Q5VZI3 342 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 WDR5BQ86VZ2 330 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 CADM3Q8N126 398 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 ENGASEQ8NFI3 743 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 CEP70Q8NHQ1 597 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 ZPBPQ9BS86 351 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 PLAC1Q9HBJ0 212 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 MYO6Q9UM54 1294 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 EVPLQ92817 2033 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 STX16-NPEPL1H3BU86 382 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 STX16O14662 325 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 SPTLC2O15270 562 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 FAM155BO75949 473 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 TK1P04183 234 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ARSAP15289 507 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ARSBP15848 533 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 RASSF2P50749 326 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 SELENOVP59797 346 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ACTR2P61160 394 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ARHGAP8P85298 464 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
PMS1-203ENST00000409593 GOLGA8FQ08AF8 430 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 BYSLQ13895 437 aaKnown RBP4.44□□□□□ -1.7
PMS1-203ENST00000409593 SYTL3Q4VX76 610 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 OTUD1Q5VV17 481 aaPredicted RBP4.44□□□□□ -1.7
PMS1-203ENST00000409593 DCAF12L2Q5VW00 463 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 AADACL2Q6P093 401 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 TMEM71Q6P5X7 295 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 BHLHA9Q7RTU4 235 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 MOGAT3Q86VF5 341 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 FTSJ3Q8IY81 847 aaKnown RBP4.44□□□□□ -1.7
PMS1-203ENST00000409593 TMEM57Q8N5G2 664 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 B4GALNT2Q8NHY0 566 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ADAMTS15Q8TE58 950 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 CATSPERBQ9H7T0 1116 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 HIF1ANQ9NWT6 349 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 FEM1BQ9UK73 627 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 ICKQ9UPZ9 632 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 DERAQ9Y315 318 aa4.44□□□□□ -1.7
PMS1-203ENST00000409593 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.43□□□□□ -1.7
PMS1-203ENST00000409593 BECN2A8MW95 431 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 IRAK2O43187 625 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 METTL18O95568 372 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 AVPR1AP37288 418 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 PPP3CCP48454 512 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 MVDP53602 400 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 IL13RA2Q14627 380 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 KIAA1161Q6NSJ0 714 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 C2CD5Q86YS7 1000 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 TRIM63Q969Q1 353 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 MIB2Q96AX9 1013 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 ZNF479Q96JC4 524 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 APOLD1Q96LR9 279 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 TEFMQ96QE5 360 aaKnown RBP4.43□□□□□ -1.7
PMS1-203ENST00000409593 TMEM204Q9BSN7 226 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 CTDSP1Q9GZU7 261 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 TWSG1Q9GZX9 223 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 TLR8Q9NR97 1041 aaKnown RBP4.43□□□□□ -1.7
PMS1-203ENST00000409593 FZD10Q9ULW2 581 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 RRP7AQ9Y3A4 280 aaKnown RBP4.43□□□□□ -1.7
PMS1-203ENST00000409593 PTGDR2Q9Y5Y4 395 aa4.43□□□□□ -1.7
PMS1-203ENST00000409593 A0A1B0GVT2 93 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 DDTLA6NHG4 134 aaPredicted RBP4.42□□□□□ -1.7
PMS1-203ENST00000409593 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
PMS1-203ENST00000409593 B9A039 149 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 RGS14O43566 566 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 HBP1O60381 514 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 NGFRP08138 427 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 RFC1P35251 1148 aaPredicted RBP4.42□□□□□ -1.7
PMS1-203ENST00000409593 TRAF1Q13077 416 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 ERV3-1Q14264 604 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 HEPHL1Q6MZM0 1159 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 PALB2Q86YC2 1186 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 SUGP1Q8IWZ8 645 aaKnown RBP4.42□□□□□ -1.7
PMS1-203ENST00000409593 SPATA5Q8NB90 893 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 CEP76Q8TAP6 659 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 SDCCAG3Q96C92 435 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms