RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 ATMQ13315 3056 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 TENM4Q6N022 2769 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 A0A1W2PR77 199 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 C10orf142B7Z368 130 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 E9PAM4 449 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 F8VZ95 297 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ATXN7O15265 892 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 P4HA2O15460 535 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 LDOC1O95751 146 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ZBED1O96006 694 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 DLDP09622 509 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 H2AFZP0C0S5 128 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 SLC6A4P31645 630 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ACADVLP49748 655 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 C21orf59P57076 290 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 RACK1P63244 317 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ZBTB16Q05516 673 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 BNIP3Q12983 259 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 HSP90B2PQ58FF3 399 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ZNF776Q68DI1 518 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 PCSK4Q6UW60 755 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 H2AFVQ71UI9 128 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 AHI1Q8N157 1196 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ANKRD52Q8NB46 1076 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 SLC30A5Q8TAD4 765 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 TMEM176AQ96HP8 235 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 IMPG2Q9BZV3 1241 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 RSPH9Q9H1X1 276 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 NEUROG2Q9H2A3 272 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 INTS6Q9UL03 887 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 PCDHGA1Q9Y5H4 931 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 A0A1W2PP55 124 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 E7ENQ6 273 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 DDX3XO00571 662 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 PMM2O15305 246 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 TBL1XO60907 577 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 SIN3BO75182 1162 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 RFPL3O75679 317 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 FTCDO95954 541 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 KRT13P13646 458 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 TNNT3P45378 269 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 PDE4CQ08493 712 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ADGRF1Q5T601 910 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 HES3Q5TGS1 186 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 BSPRYQ5W0U4 402 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 FBXL19Q6PCT2 694 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 GANCQ8TET4 914 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 NXPE2Q96DL1 559 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 PBKQ96KB5 322 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 SYT11Q9BT88 431 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 LRRC1Q9BTT6 524 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ACE2Q9BYF1 805 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 STIM2Q9P246 746 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 DNAJC12Q9UKB3 198 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 HBS1LQ9Y450 684 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 AK5Q9Y6K8 562 aa13.1□□□□□ -0.31
CHRNA1-205ENST00000409542 ARID1BQ8NFD5 2236 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 TK2O00142 265 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 MID1O15344 667 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 GABBR2O75899 941 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 ITGAVP06756 1048 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 PLA2G2AP14555 144 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 POLR2EP19388 210 aaKnown RBP13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 CXCR5P32302 372 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 CTSOP43234 321 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 NNTQ13423 1086 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 DRAP1Q14919 205 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 GOLGA7BQ2TAP0 167 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 PIK3R6Q5UE93 754 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 NADSYN1Q6IA69 706 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 GJB7Q6PEY0 223 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 SLFN11Q7Z7L1 901 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 ZNF843Q8N446 348 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms