RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CRACR2AQ9BSW2 395 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 TRIM4Q9C037 500 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ASNSD1Q9NWL6 643 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 DDIT4Q9NX09 232 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ARHGAP20Q9P2F6 1191 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 SARDHQ9UL12 918 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 SPTAN1Q13813 2472 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 AHCTF1Q8WYP5 2266 aa9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 ARID1BQ8NFD5 2236 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-203ENST00000409129 MYO9AB2RTY4 2548 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 TEX51A0A1B0GUA7 166 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 RCCD1A6NED2 376 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 BECN2A8MW95 431 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 MCF2LO15068 1137 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 ALOX15BO15296 676 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC7A4O43246 635 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 PLRG1O43660 514 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 MAGEC1O60732 1142 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 HSF2BPO75031 334 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 RFPL3O75679 317 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 GRAP2O75791 330 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 WISP1O95388 367 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 ZNF18P17022 549 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC9A1P19634 815 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 EPHA8P29322 1005 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 HNF1BP35680 557 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 NUDT1P36639 197 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 METAP1P53582 386 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 CCDC173Q0VFZ6 552 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 OVGP1Q12889 678 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 MTA1Q13330 715 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 ZNF177Q13360 481 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 DLG2Q15700 870 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 ARHGAP44Q17R89 818 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 IQCHQ86VS3 1027 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 SPATS2Q86XZ4 545 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 CREBRFQ8IUR6 639 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 OXR1Q8N573 874 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 TSC1Q92574 1164 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 RPRD1AQ96P16 312 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 CPXM1Q96SM3 734 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC25A13Q9UJS0 675 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 PPM1HQ9ULR3 514 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 PCDHGC3Q9UN70 934 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 DMTF1Q9Y222 760 aa9.42□□□□□ -0.9
NIF3L1-203ENST00000409129 UTP20O75691 2785 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC28A2O43868 658 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 GADD45BO75293 160 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 CLDN11O75508 207 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 MAT2AP31153 395 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 NOS2P35228 1153 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 ACADVLP49748 655 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 IRAK1P51617 712 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 SNX16P57768 344 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 APBA1Q02410 837 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 CENPCQ03188 943 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 TLE3Q04726 772 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 PTK2Q05397 1052 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 CNTN1Q12860 1018 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 NME3Q13232 169 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 STAT4Q14765 748 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 C5orf22Q49AR2 442 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 C6orf118Q5T5N4 469 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 AGBL4Q5VU57 503 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 SFMBT2Q5VUG0 894 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 OR6B2Q6IFH4 312 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 GBP6Q6ZN66 633 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 C11orf57Q6ZUT1 292 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 FAM183BPQ6ZVS7 135 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 KANSL1Q7Z3B3 1105 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 C14orf80Q86SX3 495 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 PACS2Q86VP3 889 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 TRIM69Q86WT6 500 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 PASD1Q8IV76 773 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 SH2D3CQ8N5H7 860 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 OR52K2Q8NGK3 314 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 SHC3Q92529 594 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 NXPE2Q96DL1 559 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 NOX5Q96PH1 765 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 SIK2Q9H0K1 926 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 APEX2Q9UBZ4 518 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 RWDD2AQ9UIY3 292 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 VPS28Q9UK41 221 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D30Q9Y2I9 924 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 OR51B4Q9Y5P0 310 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 HS3ST4Q9Y661 456 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 AK5Q9Y6K8 562 aa9.41□□□□□ -0.9
NIF3L1-203ENST00000409129 BSNQ9UPA5 3926 aa9.4□□□□□ -0.9
NIF3L1-203ENST00000409129 GTPBP10A4D1E9 387 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-203ENST00000409129 B8ZZF3 427 aa9.4□□□□□ -0.9
NIF3L1-203ENST00000409129 PRAMEF26H0Y7S4 382 aa9.4□□□□□ -0.9
NIF3L1-203ENST00000409129 M0QYT0 321 aa9.4□□□□□ -0.9
NIF3L1-203ENST00000409129 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
NIF3L1-203ENST00000409129 BNIP3LO60238 219 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms