RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TERB1Q8NA31 727 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 KCTD15Q96SI1 283 aaPredicted RBP10.82□□□□□ -0.68
RPAIN-204ENST00000405578 CALN1Q9BXU9 219 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 TPSD1Q9BZJ3 242 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 MUC3BQ9H195 1237 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 FBRSL1Q9HCM7 1045 aaKnown RBP10.82□□□□□ -0.68
RPAIN-204ENST00000405578 ABCB8Q9NUT2 735 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 MPP6Q9NZW5 540 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 EBF1Q9UH73 591 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 SALL4Q9UJQ4 1053 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 GGA2Q9UJY4 613 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 FBXO10Q9UK96 956 aa10.82□□□□□ -0.68
RPAIN-204ENST00000405578 PCDH15Q96QU1 1955 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ILVBLA1L0T0 632 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 LRRD1A4D1F6 860 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 GRID2IPA4D2P6 1211 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 FAM72CH0Y354 149 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 RAMP2O60895 175 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ZRANB2O95218 330 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 KRT1P04264 644 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 RHOCP08134 193 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 PABPC1P11940 636 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 TCF4P15884 667 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 POLR2EP19388 210 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 SLC6A11P48066 632 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 SGSHP51688 502 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 TAS2R40P59535 323 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 SULT2A1Q06520 285 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 LMAN2Q12907 356 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 SEMA3BQ13214 749 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 CA9Q16790 459 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 GAB4Q2WGN9 574 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 USP39Q53GS9 565 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 FAM72AQ5TYM5 149 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 MANEALQ5VSG8 457 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 RNF219Q5W0B1 726 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 NAIF1Q69YI7 327 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 SDE2Q6IQ49 451 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 FAM72DQ6L9T8 149 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF783Q6ZMS7 281 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 SYT13Q7L8C5 426 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 TRMT11Q7Z4G4 463 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 PIP4P1Q86T03 277 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 C11orf74Q86VG3 221 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 FAM72BQ86X60 149 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 CIR1Q86X95 450 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 VSIG1Q86XK7 387 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF683Q8IZ20 524 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 RCOR2Q8IZ40 523 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 LZTR1Q8N653 840 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 LRRC57Q8N9N7 239 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 KCNV2Q8TDN2 545 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ACDQ96AP0 544 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 RBM41Q96IZ5 413 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF670Q9BS34 389 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 C2orf49Q9BVC5 232 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 NUSAP1Q9BXS6 441 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 CIPCQ9C0C6 399 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 PRDM16Q9HAZ2 1276 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 PCDH18Q9HCL0 1135 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 TMEM248Q9NWD8 314 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 EVLQ9UI08 416 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 VPS28Q9UK41 221 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 HPCAL4Q9UM19 191 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 PLA2G4CQ9UP65 541 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 TBC1D30Q9Y2I9 924 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 HYOU1Q9Y4L1 999 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 HELZP42694 1942 aaKnown RBP10.81□□□□□ -0.68
RPAIN-204ENST00000405578 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
RPAIN-204ENST00000405578 A0A0A0MRY4 1105 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 FAM221BA6H8Z2 402 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 WASH4PA8MWX3 477 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF487B1APH4 448 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 NPC1O15118 1278 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CNTN5O94779 1100 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 TRIM16O95361 564 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ASLP04424 464 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CISD3P0C7P0 127 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ZFXP17010 805 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 GOT1P17174 413 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ENGP17813 658 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 KDELR1P24390 212 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 HLA-FP30511 346 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CTNNA1P35221 906 aaKnown RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 SERPINB6P35237 376 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 NNMTP40261 264 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 RWDD2BP57060 319 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 YBEYP58557 167 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ST8SIA6P61647 398 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 FAM193AP78312 1265 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 PARP15Q460N3 678 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ALFQ53S48 1182 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 HS1BP3Q53T59 392 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 TXNRD3NBQ6F5E7 133 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 TMCO3Q6UWJ1 677 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CYP4V2Q6ZWL3 525 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ARMCX6Q7L4S7 300 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms