RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
SMS-202ENST00000404933 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
SMS-202ENST00000404933 C15orf41Q9Y2V0 281 aa12.07□□□□□ -0.48
SMS-202ENST00000404933 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 MAGEB16A2A368 324 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 TRIM49D1C9J1S8 452 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 USP12O75317 370 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 NEBLO76041 1014 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 SEC24AO95486 1093 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 URODP06132 367 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 RAG1P15918 1043 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 SLC18A2Q05940 514 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 SPDYAQ5MJ70 313 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 HECTD3Q5T447 861 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 KLHDC10Q6PID8 442 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 OTOP3Q7RTS5 596 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 TFAP2DQ7Z6R9 452 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 DDX53Q86TM3 631 aaKnown RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 APLFQ8IW19 511 aaPredicted RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 OXNAD1Q96HP4 312 aaPredicted RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 NACA2Q9H009 215 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 NOL6Q9H6R4 1146 aaKnown RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 CYP4F11Q9HBI6 524 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 RXFP1Q9HBX9 757 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 ARHGEF3Q9NR81 526 aa12.06□□□□□ -0.48
SMS-202ENST00000404933 RPL26L1Q9UNX3 145 aaKnown RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
SMS-202ENST00000404933 TRIM43BA6NCK2 446 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 ZNF840PA6NDX5 716 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 BAIAP3O94812 1187 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 LUC7L3O95232 432 aaKnown RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 RENBPP51606 427 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 GEMP55040 296 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 MGAT5Q09328 741 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 CDH17Q12864 832 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 FRG1Q14331 258 aaKnown RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 VEPH1Q14D04 833 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 ALFQ53S48 1182 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 NECAB2Q7Z6G3 386 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 TMCO2Q7Z6W1 182 aaPredicted RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 IGSF8Q969P0 613 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 TRIM43Q96BQ3 446 aaPredicted RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 APOPT1Q96IL0 206 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 SERAC1Q96JX3 654 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 MYRFLQ96LU7 910 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 RPRD1AQ96P16 312 aaPredicted RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 RAB3IPQ96QF0 476 aaPredicted RBP12.05□□□□□ -0.48
SMS-202ENST00000404933 IL22Q9GZX6 179 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 RETREG1Q9H6L5 497 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 RBM22Q9NW64 420 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMS-202ENST00000404933 TRPM5Q9NZQ8 1165 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 PRKAG3Q9UGI9 489 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 RPS6KL1Q9Y6S9 549 aa12.05□□□□□ -0.48
SMS-202ENST00000404933 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 LPXNO60711 386 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 CNTN5O94779 1100 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 USP1O94782 785 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 HMGA1P17096 107 aaKnown RBP12.04□□□□□ -0.48
SMS-202ENST00000404933 TACR2P21452 398 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 ITGB8P26012 769 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 PPM1AP35813 382 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 PPP3CCP48454 512 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 MAPKAPK2P49137 400 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 SLC11A2P49281 568 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
SMS-202ENST00000404933 NCALDP61601 193 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 OLIG2Q13516 323 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 RAB33AQ14088 237 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 HNRNPDQ14103 355 aaKnown RBP12.04□□□□□ -0.48
SMS-202ENST00000404933 SLC1A5Q15758 541 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 TAF12Q16514 161 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 PDK4Q16654 411 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 CMPK2Q5EBM0 449 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 RGS9BPQ6ZS82 235 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 SH2D5Q6ZV89 423 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 TMEM135Q86UB9 458 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 TCP10LQ8TDR4 215 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 HMCESQ96FZ2 354 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 TRMT2BQ96GJ1 504 aaKnown RBP12.04□□□□□ -0.48
SMS-202ENST00000404933 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
SMS-202ENST00000404933 TBL1YQ9BQ87 522 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 UBP1Q9NZI7 540 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 STK39Q9UEW8 545 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 MAFFQ9ULX9 164 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 YIPF1Q9Y548 306 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 KIAA1671Q9BY89 1806 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 FAM237BA0A1B0GVD1 139 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 F5H5T6 163 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 ACSL4O60488 711 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 UGT1A9O60656 530 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 RAMP2O60895 175 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 ANP32DO95626 131 aa12.04□□□□□ -0.48
SMS-202ENST00000404933 HLA-DQB2P05538 268 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms