RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	BTBD8	Q5XKL5	378 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	NAIF1	Q69YI7	327 aa	Predicted RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SLC36A4	Q6YBV0	504 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	B3GNT8	Q7Z7M8	397 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ZC3H18	Q86VM9	953 aa	Known RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ADGRF2	Q8IZF7	708 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PDCL2	Q8N4E4	241 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ALLC	Q8N6M5	410 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LRRC52	Q8N7C0	313 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TXNDC5	Q8NBS9	432 aa	Known RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CHST14	Q8NCH0	376 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HMGB4	Q8WW32	186 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HVCN1	Q96D96	273 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CYP2S1	Q96SQ9	504 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PNKP	Q96T60	521 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DTL	Q9NZJ0	730 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HSPBP1	Q9NZL4	362 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GTF3C4	Q9UKN8	822 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ITGA11	Q9UKX5	1188 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AGAP1	Q9UPQ3	857 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MAPRE3	Q9UPY8	281 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ATP23	Q9Y6H3	246 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	VWA8	A3KMH1	1905 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CNOT1	A5YKK6	2376 aa	Known RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	WDR81	Q562E7	1941 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	NOTCH4	Q99466	2003 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TCRBV21S2A2	A0A5A6	115 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SLC12A8	A0AV02	714 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	EIF4E1B	A6NMX2	242 aa	Known RBP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461		H3BQV1	296 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461		K7EQS6	105 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LEFTY2	O00292	366 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KAT7	O95251	611 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TSPAN15	O95858	294 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TOP3B	O95985	862 aa	Known RBP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LDHA	P00338	332 aa	Known RBP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ITGB3	P05106	788 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEM191B	P0C7N4	346 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ACAT1	P24752	427 aa	Known RBP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	OPRD1	P41143	372 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PTGER3	P43115	390 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MAGEA11	P43364	429 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GRIN1	Q05586	938 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SEMA3B	Q13214	749 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	IL17A	Q16552	155 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	VSTM1	Q6UX27	236 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ATG14	Q6ZNE5	492 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DENND5B	Q6ZUT9	1274 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FILIP1	Q7Z7B0	1213 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEFF1	Q8IYR6	380 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	STKLD1	Q8NE28	680 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	OLIG1	Q8TAK6	271 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RLN3	Q8WXF3	142 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RAD54L	Q92698	747 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SPATA17	Q96L03	361 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SIGLEC10	Q96LC7	697 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FAM213A	Q9BRX8	229 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ST6GALNAC4	Q9H4F1	302 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMLHE	Q9NVH6	421 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RBAK	Q9NYW8	714 aa	Predicted RBP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GCNT4	Q9P109	453 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TBC1D14	Q9P2M4	693 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KLK13	Q9UKR3	277 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	L1RE1	Q9UN81	338 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SNX9	Q9Y5X1	595 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	STYXL1	Q9Y6J8	313 aa		7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ATXN2	Q99700	1313 aa	Known RBP	7.15	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CFAP47	Q6ZTR5	3102 aa		7.15	□□□□□ -1.27
CEACAM1-208	ENST00000403461	C2orf78	A6NCI8	922 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	TBC1D3B	A6NDS4	549 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	TCAF2	A6NFQ2	919 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	KCNK3	O14649	394 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	ZNF217	O75362	1048 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CYP17A1	P05093	508 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SERPINF2	P08697	491 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	GNS	P15586	552 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	FAH	P16930	419 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	PTPN1	P18031	435 aa	Known RBP	7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	LONP1	P36776	959 aa	Known RBP	7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	MC3R	P41968	323 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	STAT5A	P42229	794 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	TNFRSF4	P43489	277 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SLC7A9	P82251	487 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	GAD2	Q05329	585 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	KDSR	Q06136	332 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SLC14A1	Q13336	389 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	DHCR24	Q15392	516 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CR1L	Q2VPA4	569 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	TEPP	Q6URK8	271 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CD300LD	Q6UXZ3	194 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	ZNF662	Q6ZS27	426 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	THNSL2	Q86YJ6	484 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	BRSK2	Q8IWQ3	736 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SYCP3	Q8IZU3	236 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	FAM26E	Q8N5C1	309 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CSGALNACT2	Q8N6G5	542 aa		7.14	□□□□□ -1.27
CEACAM1-208	ENST00000403461	IL17RC	Q8NAC3	791 aa		7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms