RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ZSCAN32Q9NX65 697 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 KCTD5Q9NXV2 234 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 A0A1W2PQF6 199 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TOR1BO14657 336 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 MCF2LO15068 1137 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 LRP3O75074 770 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SOCS5O75159 536 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PALMO75781 387 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PEX11BO96011 259 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 KRT1P04264 644 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SRCP12931 536 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SOX9P48436 509 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 CDR1P51861 262 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TERF1P54274 439 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 ARF5P84085 180 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 CBLBQ13191 982 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 UBXN2BQ14CS0 331 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 AGERQ15109 404 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 FSCBQ5H9T9 825 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 IER5LQ5T953 404 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 FAM46CQ5VWP2 391 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 MAML2Q8IZL2 1156 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 PLD5Q8N7P1 536 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 C12orf50Q8NA57 414 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 HAUS1Q96CS2 278 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 NAP1L3Q99457 506 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 IL12RB2Q99665 862 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 MGME1Q9BQP7 344 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SIK2Q9H0K1 926 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 ATP13A1Q9HD20 1204 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 CLEC4EQ9ULY5 219 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PPIL1Q9Y3C6 166 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SZT2Q5T011 3432 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 BCLAF3A2AJT9 711 aaKnown RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 DLL1O00548 723 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 MATN3O15232 486 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TSPAN3O60637 253 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 MAFKO60675 156 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 CD160O95971 181 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PRNPP04156 253 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 C5AR1P21730 350 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 NBL1P41271 181 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 IRAK1P51617 712 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 COPAP53621 1224 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 VCPP55072 806 aaKnown RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 KDSRQ06136 332 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 NOMO1Q15155 1222 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 EGFLAMQ63HQ2 1017 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 ZNF776Q68DI1 518 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 C22orf39Q6P5X5 142 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 RABEPKQ7Z6M1 372 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 DNAAF5Q86Y56 855 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PYROXD2Q8N2H3 581 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 CADM4Q8NFZ8 388 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 QKIQ96PU8 341 aaKnown RBP eCLIP7.68□□□□□ -1.183e-8■■■□□ 15.2
USP16-204ENST00000399976 MUC3BQ9H195 1237 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SGK2Q9HBY8 427 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 ZDHHC4Q9NPG8 344 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SEPT3Q9UH03 358 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PCSK1NQ9UHG2 260 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 FEZ2Q9UHY8 353 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 VPS28Q9UK41 221 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TRHDEQ9UKU6 1024 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 ATP8A1Q9Y2Q0 1164 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 FARP1Q9Y4F1 1045 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 CAPN6Q9Y6Q1 641 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 SYNJ2BP-COX16A0A087WUM0 186 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 DAPK3O43293 454 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 LAMTOR5O43504 91 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 RRP9O43818 475 aaKnown RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 KLF8O95600 359 aaPredicted RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 CR2P20023 1033 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 NFKBIAP25963 317 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 SNRPD1P62314 119 aaKnown RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 MTAPQ13126 283 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 GAS6Q14393 721 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 C9orf64Q5T6V5 341 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 TXNRD3NBQ6F5E7 133 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 RPLP0P6Q8NHW5 317 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 DTX3LQ8TDB6 740 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 OR8D1Q8WZ84 308 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 RAPGEF5Q92565 580 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 GDAP1L1Q96MZ0 367 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 RUNDC3BQ96NL0 473 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 FERMT1Q9BQL6 677 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 FOXQ1Q9C009 403 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 EPC1Q9H2F5 836 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 FBRSL1Q9HCM7 1045 aaKnown RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 ITM2CQ9NQX7 267 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 COX16Q9P0S2 106 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 UBA2Q9UBT2 640 aaPredicted RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 C1QTNF3-AMACRE9PGA6 284 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 KIF5CO60282 957 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 RNASEH1O60930 286 aaKnown RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 IGSF6O95976 241 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 PTMAP06454 111 aaKnown RBP7.67□□□□□ -1.18
USP16-204ENST00000399976 TCF4P15884 667 aa7.67□□□□□ -1.18
USP16-204ENST00000399976 TCP1P17987 556 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms