RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SERPINA4P29622 427 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 MMP13P45452 471 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 NDST1P52848 882 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ACLYP53396 1101 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF846Q147U1 533 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF549Q6P9A3 640 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CAPSLQ8WWF8 208 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 SUSD6Q92537 303 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 VPS35Q96QK1 796 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 MAT2BQ9NZL9 334 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ING4Q9UNL4 249 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 OR10H1Q9Y4A9 318 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 TIMM13Q9Y5L4 95 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 URADA6NGE7 173 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 DLG3Q92796 817 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CLIP3Q96DZ5 547 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 TMEM51Q9NW97 253 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 TNFSF13BQ9Y275 285 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 GPC6Q9Y625 555 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 VAPBO95292 243 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 HERVK_113P62684 666 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 RGS1Q08116 209 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ITGADQ13349 1161 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 GRIK4Q16099 956 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 FNIP1Q8TF40 1166 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ATXN2LQ8WWM7 1075 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ELMO1Q92556 727 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 PRCCQ92733 491 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CAVIN3Q969G5 261 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 MRPL9Q9BYD2 267 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 SEMA4BQ9NPR2 832 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 PRDM8Q9NQV8 689 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 INTS7Q9NVH2 962 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CDH9Q9ULB4 789 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 TCEA3O75764 348 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 GNRH1P01148 92 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ARP10275 920 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 RPA3P35244 121 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 UGT2B15P54855 530 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 SMIM11AP58511 58 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 NEUROD4Q9HD90 331 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CCDC162PA2VCL2 907 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 MCIDASD6RGH6 385 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CCNYL3P0C7X3 344 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 AMPD1P23109 780 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 BHLHB9Q6PI77 547 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 OFCC1Q8IZS5 231 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 PGLYRP2Q96PD5 576 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 TMA7Q9Y2S6 64 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 PRDM15P57071 1507 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 RGS20O76081 388 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CHRNGP07510 517 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CDK16Q00536 496 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 TNK2Q07912 1038 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 DGCR6Q14129 220 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 KCTD21Q4G0X4 260 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 LYPLAL1Q5VWZ2 237 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 USP49Q70CQ1 688 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CACUL1Q86Y37 369 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 HAVCR1Q96D42 359 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ELOVL4Q9GZR5 314 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 OSGEPQ9NPF4 335 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 PIH1D1Q9NWS0 290 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 KLQ9UEF7 1012 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 AGRPO00253 132 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 SLC28A1O00337 649 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ANXA5P08758 320 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 PTPN1P18031 435 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CAP2P40123 477 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 BTG3Q14201 252 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF268Q14587 947 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 MARK2Q7KZI7 788 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ADGRG2Q8IZP9 1017 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 AADATQ8N5Z0 425 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 TSPAN14Q8NG11 270 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 SELENOMQ8WWX9 145 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 MLPHQ9BV36 600 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 POLR1EQ9GZS1 481 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CRISPLD1Q9H336 500 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 MARK1Q9P0L2 795 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ZBTB22O15209 634 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 SCGNO76038 276 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms