RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CCDC163A0A0D9SF12 145 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 BCKDHBP21953 392 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 SERPINH1P50454 418 aaKnown RBP16.1■□□□□ 0.17
MBD1-207ENST00000398488 NDST2P52849 883 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 NRLP54845 237 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 YBEYP58557 167 aaPredicted RBP16.1■□□□□ 0.17
MBD1-207ENST00000398488 RPS14P62263 151 aaKnown RBP16.1■□□□□ 0.17
MBD1-207ENST00000398488 STARD3Q14849 445 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 LLGL1Q15334 1064 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 MAP7D1Q3KQU3 841 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 ACCSLQ4AC99 568 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 LRRC38Q5VT99 294 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 NCBP2-AS2Q69YL0 99 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 DAAM2Q86T65 1068 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 RHOT1Q8IXI2 618 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 CHST14Q8NCH0 376 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 LRRN4Q8WUT4 740 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 PDFQ9HBH1 243 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
MBD1-207ENST00000398488 CAPN6Q9Y6Q1 641 aa16.1■□□□□ 0.17
MBD1-207ENST00000398488 EDDM13A0A1B0GTR0 161 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 ALDH1A2O94788 518 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 MAP3K6O95382 1288 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 KRT1P04264 644 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 NBL1P41271 181 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 ZNF135P52742 658 aaPredicted RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 NAP1L1P55209 391 aaKnown RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 KIF5AQ12840 1032 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 PDK2Q15119 407 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 PARP15Q460N3 678 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 FAM182AQ5T1J6 154 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 MFSD7Q6UXD7 560 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 KIAA1324Q6UXG2 1013 aaKnown RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 ZNF670Q9BS34 389 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 RCOR3Q9P2K3 495 aaPredicted RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 SARDHQ9UL12 918 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 DFFAO00273 331 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 MFSD11O43934 449 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 BNIP3LO60238 219 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 PALMO75781 387 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 CTSLP07711 333 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 C7P10643 843 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 P2RY2P41231 377 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 ADCY2Q08462 1091 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 SLC10A2Q12908 348 aaPredicted RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 CYTH1Q15438 398 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 LPAL2Q16609 132 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 ZFYVE27Q5T4F4 411 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 RETSATQ6NUM9 610 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 C22orf39Q6P5X5 142 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 TMCO3Q6UWJ1 677 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 ZNF354CQ86Y25 554 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 OR2A12Q8NGT7 310 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 GAB3Q8WWW8 586 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 RNF157Q96PX1 679 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 HERPUD2Q9BSE4 406 aa16.09■□□□□ 0.17
MBD1-207ENST00000398488 PACSIN2Q9UNF0 486 aaPredicted RBP16.09■□□□□ 0.17
MBD1-207ENST00000398488 PLK4O00444 970 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 PRAMEF11O60813 436 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 PEX11BO96011 259 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 KRT10P13645 584 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 ETFBP38117 255 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 NNMTP40261 264 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 GBE1Q04446 702 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 E2F5Q15329 346 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 TAZQ16635 292 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 NT5DC3Q86UY8 548 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 KBTBD6Q86V97 674 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 MMAAQ8IVH4 418 aaKnown RBP16.08■□□□□ 0.16
MBD1-207ENST00000398488 KIAA1524Q8TCG1 905 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 ALG3Q92685 438 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 SIPA1Q96FS4 1042 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 SERGEFQ9UGK8 458 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 GUCA1BQ9UMX6 200 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 CYP8B1Q9UNU6 501 aa16.08■□□□□ 0.16
MBD1-207ENST00000398488 ARIH1Q9Y4X5 557 aaPredicted RBP16.08■□□□□ 0.16
MBD1-207ENST00000398488 GPR179Q6PRD1 2367 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 ABCA7Q8IZY2 2146 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 IGHV1OR15-9A0A0B4J2B8 117 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 PSTPIP1O43586 416 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 RPP40O75818 363 aaKnown RBP16.07■□□□□ 0.16
MBD1-207ENST00000398488 TMCC1O94876 653 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 FTCDO95954 541 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 GKP32189 559 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 CDKN2BP42772 138 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 PEX5P50542 639 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 SLC20A2Q08357 652 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 PAFAH1B3Q15102 231 aaKnown RBP16.07■□□□□ 0.16
MBD1-207ENST00000398488 ATXN7L2Q5T6C5 722 aaPredicted RBP16.07■□□□□ 0.16
MBD1-207ENST00000398488 AADACL2Q6P093 401 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 DPY19L3Q6ZPD9 716 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 PLD5Q8N7P1 536 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 SUMF1Q8NBK3 374 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 OR6K2Q8NGY2 324 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms