RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SEMA4BQ9NPR2 832 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SEPT3Q9UH03 358 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ZMYM5Q9UJ78 669 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 F5H5T6 163 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 FBXO21O94952 628 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SLC2A3P11169 496 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ERCC2P18074 760 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SKIV2L2P42285 1042 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 DGCR6Q14129 220 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 MAPRE1Q15691 268 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 PSTKQ8IV42 348 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 GPC2Q8N158 579 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 CLPBQ9H078 707 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SMPD4Q9NXE4 827 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 TELO2Q9Y4R8 837 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ARFGEF1Q9Y6D6 1849 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 HDAC3O15379 428 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 NPY2RP49146 381 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SAMD4BQ5PRF9 694 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 FKBP1CQ5VVH2 108 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 OVOS1Q6IE37 1185 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ZFP1Q6P2D0 407 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 DDX53Q86TM3 631 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SAPCD2Q86UD0 394 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 LPCAT1Q8NF37 534 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 WNT8BQ93098 351 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 VTI1BQ9UEU0 232 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 KANSL1LA0AUZ9 987 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 A8MX80 341 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 CLDN5O00501 218 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 DHX15O43143 795 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 CCNT2O60583 730 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 RASSF9O75901 435 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SERPINF2P08697 491 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 PTPRAP18433 802 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 PSME3P61289 254 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 RIPK1Q13546 671 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 MILR1Q7Z6M3 343 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 NDRG1Q92597 394 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 PARK7Q99497 189 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 ACO2Q99798 780 aaKnown RBP10.92□□□□□ -0.66
CCDC40-204ENST00000397545 SLC25A23Q9BV35 468 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 XPR1Q9UBH6 696 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 EGFL7Q9UHF1 273 aa10.92□□□□□ -0.66
CCDC40-204ENST00000397545 DPYSL4O14531 572 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 CYBBP04839 570 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 RENBPP51606 427 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PPP1R26Q5T8A7 1209 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PPP4R4Q6NUP7 873 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 RBM44Q6ZP01 1051 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 ZCCHC7Q8N3Z6 543 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 FOPNLQ96NB1 174 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 TEX12Q9BXU0 123 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 FAM192AQ9GZU8 254 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SNX15Q9NRS6 342 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SYBUQ9NX95 663 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 LSM7Q9UK45 103 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 WASF2Q9Y6W5 498 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SIPA1L1O43166 1804 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 BTN3A1O00481 513 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 MGRN1O60291 552 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 RAMP2O60895 175 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 ERBB2P04626 1255 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SERPINA6P08185 405 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 OR1E1P30953 314 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 LHX1P48742 406 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SLC11A2P49281 568 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 CCNHP51946 323 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 RAD23AP54725 363 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 DEFA1P59665 94 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 DEFA3P59666 94 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 ROR2Q01974 943 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PACS1Q6VY07 963 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PATL1Q86TB9 770 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SLC22A9Q8IVM8 553 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SLC4A5Q9BY07 1137 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 MROH8Q9H579 483 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 TMEM134Q9H6X4 195 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PARVBQ9HBI1 364 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PCDH18Q9HCL0 1135 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 VPS45Q9NRW7 570 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 NOCTQ9UK39 431 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 RGSL1A5PLK6 1076 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 CFAP99D6REC4 459 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 AGRPO00253 132 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 HS6ST1O60243 411 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 KRT75O95678 551 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 C2P06681 752 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 BPGMP07738 259 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PCNAP12004 261 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 CRABP2P29373 138 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 FMO4P31512 558 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 CCT8P50990 548 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 OXCT1P55809 520 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 MAXP61244 160 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 FOLH1Q04609 750 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms