RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 FBXO9Q9UK97 447 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 GJD2Q9UKL4 321 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SOX13Q9UN79 622 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 RABL2BQ9UNT1 228 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 INPP5FQ9Y2H2 1132 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 NOX1Q9Y5S8 564 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SQORQ9Y6N5 450 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 NUP205Q92621 2012 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 IGKV6-21A0A0C4DH24 114 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PRR5-ARHGAP8B1AHC4 643 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 TRPA1O75762 1119 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CRTAMO95727 393 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SNRPAP09012 282 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 THRAP10827 490 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PABPC1P11940 636 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 P4HA1P13674 534 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ZNF23P17027 643 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PTPN2P17706 415 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 POLR2EP19388 210 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 ETV4P43268 484 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 GSSP48637 474 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SLC5A3P53794 718 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 EPHB1P54762 984 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 RPS3AP61247 264 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 RBP5P82980 135 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ARHGAP8P85298 464 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 MYBPC1Q00872 1141 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ATP1A4Q13733 1029 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 TFDP2Q14188 446 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ANKDD1AQ495B1 522 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 RARS2Q5T160 578 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 FAAH2Q6GMR7 532 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ELMSAN1Q6PJG2 1045 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CATSPER4Q7RTX7 472 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CMC1Q7Z7K0 106 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PNPLA1Q8N8W4 532 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 TSPAN14Q8NG11 270 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SLC16A10Q8TF71 515 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 THAP11Q96EK4 314 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PLEKHA8Q96JA3 519 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SPACA7Q96KW9 195 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CCDC138Q96M89 665 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 WWP1Q9H0M0 922 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 VPS33BQ9H267 617 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ARMC7Q9H6L4 198 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 LIN28AQ9H9Z2 209 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 POPDC2Q9HBU9 364 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 VTA1Q9NP79 307 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SLC38A7Q9NVC3 462 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 KCNK4Q9NYG8 393 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 AP4E1Q9UPM8 1137 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 AP4B1Q9Y6B7 739 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 DNAH14Q0VDD8 3507 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 HMX2A2RU54 273 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 TMEM114B3SHH9 223 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 E7ESA3 106 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CCNT2O60583 730 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 TSPAN1O60635 241 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 RFPL1O75677 317 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 DGKIO75912 1065 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 BEST1O76090 585 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ZBTB11O95625 1053 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 APOEP02649 317 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ATP5BP06576 529 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 TPH1P17752 444 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 NCF2P19878 526 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 MGAT1P26572 445 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 MSX2P35548 267 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 SLC25A3Q00325 362 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SLC6A3Q01959 620 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CCNIQ14094 377 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 HSF5Q4G112 596 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 PAN2Q504Q3 1202 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 IL31Q6EBC2 164 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PPP1R2P3Q6NXS1 205 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 RNF111Q6ZNA4 994 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 FASTKD5Q7L8L6 764 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 PLPPR4Q7Z2D5 763 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 AMIGO2Q86SJ2 522 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 C11orf74Q86VG3 221 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 FNIP1Q8TF40 1166 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CHPT1Q8WUD6 406 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 KHSRPQ92945 711 aaKnown RBP eCLIP5.12□□□□□ -1.592e-7■■■■□ 23.4
SSR1-202ENST00000397511 ALKBH8Q96BT7 664 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 TBCBQ99426 244 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CAB39LQ9H9S4 337 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PALMDQ9NP74 551 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 C6orf203Q9P0P8 240 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 PAK5Q9P286 719 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 HEMK1Q9Y5R4 338 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 ZNF638Q14966 1978 aaKnown RBP5.11□□□□□ -1.59
SSR1-202ENST00000397511 TPP1O14773 563 aa5.11□□□□□ -1.59
SSR1-202ENST00000397511 CLASP2O75122 1294 aaKnown RBP5.11□□□□□ -1.59
SSR1-202ENST00000397511 IL18RAPO95256 599 aa5.11□□□□□ -1.59
SSR1-202ENST00000397511 C6orf222P0C671 652 aaPredicted RBP5.11□□□□□ -1.59
SSR1-202ENST00000397511 CD1EP15812 388 aa5.11□□□□□ -1.59
SSR1-202ENST00000397511 ENDOUP21128 410 aaKnown RBP5.11□□□□□ -1.59
SSR1-202ENST00000397511 PTPN7P35236 360 aa5.11□□□□□ -1.59
SSR1-202ENST00000397511 ESRRGP62508 458 aa5.11□□□□□ -1.59
SSR1-202ENST00000397511 NSUN2Q08J23 767 aaKnown RBP eCLIP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms