RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MAPKAPK2P49137 400 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 CLCN6P51797 869 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 GFPT1Q06210 699 aaPredicted RBP14.91□□□□□ -0.02
SEC13-208ENST00000397109 SLC20A2Q08357 652 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 DLG2Q15700 870 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 EFHC2Q5JST6 749 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 DCAF12L1Q5VU92 463 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 DAB2IPQ5VWQ8 1189 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 RWDD4Q6NW29 188 aaKnown RBP14.91□□□□□ -0.02
SEC13-208ENST00000397109 STK40Q8N2I9 435 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 CCDC185Q8N715 623 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 OR8D1Q8WZ84 308 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 TBC1D31Q96DN5 1066 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 CCDC114Q96M63 670 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 PSMB7Q99436 277 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 TMEM9BQ9NQ34 198 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 ZNF212Q9UDV6 495 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 VPS51Q9UID3 782 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 SCINQ9Y6U3 715 aa14.91□□□□□ -0.02
SEC13-208ENST00000397109 A0A0D9SEW6 157 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 CXorf51AA0A1B0GTR3 108 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 ALOX15BO15296 676 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 MID1O15344 667 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 LRIG2O94898 1065 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 SYPP08247 313 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 L1CAMP32004 1257 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 ACSL1P33121 698 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 NUMBP49757 651 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 GNA12Q03113 381 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 FAM46CQ5VWP2 391 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 RETSATQ6NUM9 610 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 ATP11CQ8NB49 1132 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 CHP1Q99653 195 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 OMDQ99983 421 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 NCAPGQ9BPX3 1015 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 SPON2Q9BUD6 331 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 CAPN10Q9HC96 672 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 MRPL47Q9HD33 250 aaKnown RBP14.9□□□□□ -0.02
SEC13-208ENST00000397109 TMEM248Q9NWD8 314 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 MYO1AQ9UBC5 1043 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
SEC13-208ENST00000397109 FZD4Q9ULV1 537 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 NENFQ9UMX5 172 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 EPN1Q9Y6I3 576 aaPredicted RBP14.9□□□□□ -0.02
SEC13-208ENST00000397109 SPTBN2O15020 2390 aa14.9□□□□□ -0.02
SEC13-208ENST00000397109 A0A1B0GTW7 788 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 DCDC2BA2VCK2 349 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 MCF2LO15068 1137 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 SNAP91O60641 907 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 IL1BP01584 269 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 SRCP12931 536 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 GOT1P17174 413 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 ENGP17813 658 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 PSMA2P25787 234 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 EIF4A3P38919 411 aaKnown RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 PSMD8P48556 350 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 ATXN3P54252 364 aaPredicted RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 SLC18A3Q16572 532 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 NLRP14Q86W24 1093 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 OR7D4Q8NG98 312 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FNIP1Q8TF40 1166 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 ZNF653Q96CK0 615 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
SEC13-208ENST00000397109 ATP13A1Q9HD20 1204 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 DONSONQ9NYP3 566 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 ADAMTS1Q9UHI8 967 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FZD10Q9ULW2 581 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 DCHS1Q96JQ0 3298 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 A0A087X0T9 212 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 A0A1W2PP55 124 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 TMEM191CA6NGB0 347 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 SOWAHDA6NJG2 315 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 LRRC72A6NJI9 287 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 C4orf47A7E2U8 309 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 C1QTNF3-AMACRE9PGA6 284 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FAM72CH0Y354 149 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 CBX4O00257 560 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 CDX4O14627 284 aaPredicted RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 TM4SF5O14894 197 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 RNASEH2AO75792 299 aaKnown RBP14.89□□□□□ -0.03
SEC13-208ENST00000397109 RNF8O76064 485 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 MT-CO1P00395 513 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FAM228BP0C875 321 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 VAV1P15498 845 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 MAOBP27338 520 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 HTR7P34969 479 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 OGDHQ02218 1023 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FAM72AQ5TYM5 149 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FAM72DQ6L9T8 149 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 Q6ZVU0 165 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 FAM72BQ86X60 149 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 HDDC3Q8N4P3 179 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 EPAS1Q99814 870 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 ZDHHC5Q9C0B5 715 aa14.89□□□□□ -0.03
SEC13-208ENST00000397109 MIR1-1HGQ9H1L0 117 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms