RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 LATS1O95835 1130 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 IGHV4-34P06331 123 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 RRM1P23921 792 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 HOXD9P28356 352 aaPredicted RBP14.08□□□□□ -0.16
SEC13-205ENST00000397101 HLA-FP30511 346 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 ACADVLP49748 655 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 RNASE9P60153 205 aaKnown RBP14.08□□□□□ -0.16
SEC13-205ENST00000397101 EFEMP1Q12805 493 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 SFSWAPQ12872 951 aaKnown RBP14.08□□□□□ -0.16
SEC13-205ENST00000397101 TARDBPQ13148 414 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■□□□ 14.1
SEC13-205ENST00000397101 FAM102AQ5T9C2 384 aaPredicted RBP14.08□□□□□ -0.16
SEC13-205ENST00000397101 KIAA0895LQ68EN5 471 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 FBXL19Q6PCT2 694 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 DCUN1D2Q6PH85 259 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 FAM183BPQ6ZVS7 135 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 TMEM110Q86TL2 294 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 DENND1CQ8IV53 801 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 AHI1Q8N157 1196 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 FAM149B1Q96BN6 582 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 IRX2Q9BZI1 471 aaPredicted RBP14.08□□□□□ -0.16
SEC13-205ENST00000397101 ULBP1Q9BZM6 244 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 MRPL47Q9HD33 250 aaKnown RBP14.08□□□□□ -0.16
SEC13-205ENST00000397101 PRSS16Q9NQE7 514 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 PARVAQ9NVD7 372 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 MARCH2Q9P0N8 246 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 NENFQ9UMX5 172 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 GUCA1BQ9UMX6 200 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 AK5Q9Y6K8 562 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 SCINQ9Y6U3 715 aa14.08□□□□□ -0.16
SEC13-205ENST00000397101 MUC22E2RYF6 1773 aaPredicted RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 ERVH48-1M5A8F1 160 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ZBED1O96006 694 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ITGAVP06756 1048 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 DLDP09622 509 aaKnown RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 GABRB2P47870 512 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 SLC6A3Q01959 620 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 SEMG2Q02383 582 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 CFHR1Q03591 330 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 TRIP4Q15650 581 aaPredicted RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 FNDC3BQ53EP0 1204 aaKnown RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 CCDC157Q569K6 752 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 HES3Q5TGS1 186 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ZNF776Q68DI1 518 aaPredicted RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 LAYNQ6UX15 382 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ADIPOR2Q86V24 386 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 XYLT1Q86Y38 959 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ZDHHC17Q8IUH5 632 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 ARHGEF26Q96DR7 871 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 NUP85Q9BW27 656 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ERVMER34-1Q9H9K5 563 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 METTL5Q9NRN9 209 aaKnown RBP14.07□□□□□ -0.16
SEC13-205ENST00000397101 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 ZNF462Q96JM2 2506 aa14.07□□□□□ -0.16
SEC13-205ENST00000397101 MACROD2A1Z1Q3 448 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 RCCD1A6NED2 376 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 GOLGA6L9A6NEM1 432 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 J3QKU1 62 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 SART1O43290 800 aaKnown RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 BUB1O43683 1085 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 GRAP2O75791 330 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 CYP1A2P05177 515 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 ATP5BP06576 529 aaKnown RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 HMBSP08397 361 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 KRT3P12035 628 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 DESP17661 470 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 ACTN2P35609 894 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 RXRGP48443 463 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 IL9RQ01113 521 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 TLE3Q04726 772 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 PTP4A2Q12974 167 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 SHBQ15464 509 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 IFI16Q16666 785 aaKnown RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 EFHC1Q5JVL4 640 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 MPP7Q5T2T1 576 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 PCSK4Q6UW60 755 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 CHST9Q7L1S5 443 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 CCAR2Q8N163 923 aaKnown RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 C17orf53Q8N3J3 647 aaPredicted RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 OXR1Q8N573 874 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 SLC35G2Q8TBE7 412 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 KIAA1524Q8TCG1 905 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 CLEC4CQ8WTT0 213 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 NDRG1Q92597 394 aaKnown RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 LACRTQ9GZZ8 138 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 RSPH9Q9H1X1 276 aaPredicted RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 CNGB3Q9NQW8 809 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 HBS1LQ9Y450 684 aaKnown RBP14.06□□□□□ -0.16
SEC13-205ENST00000397101 PAXBP1Q9Y5B6 917 aa14.06□□□□□ -0.16
SEC13-205ENST00000397101 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 A0A0U1RQJ8 604 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 A0A1W2PR77 199 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 SLC12A8A0AV02 714 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 TMEM110-MUSTN1A8MSY1 372 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 PJA2O43164 708 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 GJB6O95452 261 aa14.05□□□□□ -0.16
SEC13-205ENST00000397101 PABPC1P11940 636 aaKnown RBP14.05□□□□□ -0.16
SEC13-205ENST00000397101 EPHA8P29322 1005 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms