RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 HAUS4Q9H6D7 363 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 C6orf106Q9H6K1 298 aaPredicted RBP14.27□□□□□ -0.13
SEC13-204ENST00000397099 CATSPERBQ9H7T0 1116 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 ZNF212Q9UDV6 495 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 EIF2B4Q9UI10 523 aaKnown RBP14.27□□□□□ -0.13
SEC13-204ENST00000397099 NUMA1Q14980 2115 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 ADAMTS9Q9P2N4 1935 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 A0A1W2PP55 124 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 FGF10O15520 208 aaPredicted RBP14.26□□□□□ -0.13
SEC13-204ENST00000397099 CBFA2T2O43439 604 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 RNF8O76064 485 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 SRCP12931 536 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 RRM1P23921 792 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 GALCP54803 685 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 ZBED6P86452 979 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 SHC2P98077 582 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 MAMLD1Q13495 774 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 ACAP1Q15027 740 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 NEK5Q6P3R8 708 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 PSTKQ8IV42 348 aaKnown RBP14.26□□□□□ -0.13
SEC13-204ENST00000397099 ZCCHC9Q8N567 271 aaKnown RBP14.26□□□□□ -0.13
SEC13-204ENST00000397099 OR52K2Q8NGK3 314 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 OR2I1PQ8NGU4 316 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 C1orf216Q8TAB5 229 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 CASKIN2Q8WXE0 1202 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 SNX19Q92543 992 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 ISG20Q96AZ6 181 aaKnown RBP14.26□□□□□ -0.13
SEC13-204ENST00000397099 BIRC7Q96CA5 298 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 PSMB7Q99436 277 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 SPON2Q9BUD6 331 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 NEUROG2Q9H2A3 272 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 ATP13A1Q9HD20 1204 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 DYRK4Q9NR20 520 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 PPM1HQ9ULR3 514 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 CAPN11Q9UMQ6 739 aa14.26□□□□□ -0.13
SEC13-204ENST00000397099 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
SEC13-204ENST00000397099 A0A0D9SEW6 157 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 A0A1W2PPC4 97 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 CBX4O00257 560 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 CCP110O43303 1012 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 RAMP2O60895 175 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 LRIG2O94898 1065 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 FSBPO95073 299 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 FTLP02792 175 aaPredicted RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 SERPING1P05155 500 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 PBX1P40424 430 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 SERPINH1P50454 418 aaKnown RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 YBEYP58557 167 aaPredicted RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 RPL7AP62424 266 aaKnown RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 RACK1P63244 317 aaKnown RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 GRIK2Q13002 908 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 SLC45A4Q5BKX6 768 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 SCYL2Q6P3W7 929 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 Q6ZVU0 165 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 ZNF571Q7Z3V5 609 aaPredicted RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 TMC6Q7Z403 805 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 PHLDB2Q86SQ0 1253 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 ZSCAN30Q86W11 494 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 NLRP14Q86W24 1093 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 AADATQ8N5Z0 425 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 OR14C36Q8NHC7 312 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 LRIG1Q96JA1 1093 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 ACE2Q9BYF1 805 aaPredicted RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 ISCUQ9H1K1 167 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 MTG2Q9H4K7 406 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 PREBQ9HCU5 417 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 TMPRSS4Q9NRS4 437 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 LUC7L2Q9Y383 392 aaKnown RBP14.25□□□□□ -0.13
SEC13-204ENST00000397099 PCDHGB2Q9Y5G2 931 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 SNX10Q9Y5X0 201 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 CEP295Q9C0D2 2601 aa14.25□□□□□ -0.13
SEC13-204ENST00000397099 WASH4PA8MWX3 477 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 PLRG1O43660 514 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 MAGEC1O60732 1142 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 PSMA2P25787 234 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 EPHB2P29323 1055 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 CHRNA3P32297 505 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 DRD3P35462 400 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 ADPRHP54922 357 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 TRIM14Q14142 442 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 SUZ12Q15022 739 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 POLD3Q15054 466 aaPredicted RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 PARP15Q460N3 678 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 TDRD12Q587J7 1177 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 ARTNQ5T4W7 220 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 C22orf39Q6P5X5 142 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 NCEH1Q6PIU2 408 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 ADAT2Q7Z6V5 191 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 PRPF39Q86UA1 669 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 DRC7Q8IY82 874 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 CCDC185Q8N715 623 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 RTL3Q8N8U3 475 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 OR2A12Q8NGT7 310 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 PIP4K2CQ8TBX8 421 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 ARHGEF2Q92974 986 aaKnown RBP14.24□□□□□ -0.13
SEC13-204ENST00000397099 TM9SF3Q9HD45 589 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 IL36AQ9UHA7 158 aa14.24□□□□□ -0.13
SEC13-204ENST00000397099 FZD10Q9ULW2 581 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms