RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 OAZ1P54368 228 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PGM5Q15124 567 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TERF2Q15554 542 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TARBP2Q15633 366 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 MINDY4Q4G0A6 757 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 NEPROQ6NW34 567 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SLC30A9Q6PML9 568 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 IKBIPQ70UQ0 350 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 GET4Q7L5D6 327 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZNF720Q7Z2F6 126 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ARPINQ7Z6K5 226 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 DENND1CQ8IV53 801 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SETD9Q8NE22 299 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SEC16BQ96JE7 1060 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 FERD3LQ96RJ6 166 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ERGIC2Q96RQ1 377 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 EHD4Q9H223 541 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 COPG2Q9UBF2 871 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CROTQ9UKG9 612 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PHTF1Q9UMS5 762 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SLC12A4Q9UP95 1085 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PRKAB1Q9Y478 270 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ACTL7BQ9Y614 415 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SYNMO15061 1565 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 A0A096LPK6 155 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 LACTBL1A8MY62 500 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SLC25A14O95258 325 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 MED26O95402 600 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 LDLRP01130 860 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CLUP10909 449 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PON1P27169 355 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 STXBP1P61764 594 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 LIN54Q6MZP7 749 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 NANOGNBQ7Z5D8 188 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZNF605Q86T29 641 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CAMK1DQ8IU85 385 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PHYKPLQ8IUZ5 450 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TRPV3Q8NET8 790 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 FBXO22Q8NEZ5 403 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZNF563Q8TA94 476 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 HELQQ8TDG4 1101 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 NARS2Q96I59 477 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 RNF145Q96MT1 663 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 APBA2Q99767 749 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ACAT2Q9BWD1 397 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 REEP1Q9H902 201 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SLC15A5A6NIM6 579 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 MAGEB3O15480 346 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 TRUB2O95900 331 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 GIMD1P0DJR0 217 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 CBX5P45973 191 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 IDH2P48735 452 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 CDH8P55286 799 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 C1QBPQ07021 282 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 TRIM25Q14258 630 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 ZC3H12AQ5D1E8 599 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 TMEM164Q5U3C3 297 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 WSCD1Q658N2 575 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 RASGRP2Q7LDG7 609 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 IQCF2Q8IXL9 164 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 SVOPQ8N4V2 548 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 EEF1AKMT1Q8WVE0 214 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 MTFMTQ96DP5 389 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 ARHGAP9Q9BRR9 750 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 UGT2B28Q9BY64 529 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 PABPC3Q9H361 631 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 CATSPERZQ9NTU4 200 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 CLASP1Q7Z460 1538 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 C1orf232A0A0U1RR37 186 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 MAGEC1O60732 1142 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 FGBP02675 491 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 ELFN1P0C7U0 828 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 ALPPL2P10696 532 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 ETS1P14921 441 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 CCND1P24385 295 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 CYP2C18P33260 490 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 WASP42768 502 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 ATCAYQ86WG3 371 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 RASAL3Q86YV0 1011 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 CPA6Q8N4T0 437 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 GMCL1P1Q8NEA9 526 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 HIC2Q96JB3 615 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 UROC1Q96N76 676 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 TBL1YQ9BQ87 522 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 ALDH8A1Q9H2A2 487 aaPredicted RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 RIBC2Q9H4K1 309 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 PIH1D1Q9NWS0 290 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 HCN3Q9P1Z3 774 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 INVSQ9Y283 1065 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 GSTK1Q9Y2Q3 226 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 VSTM5A8MXK1 200 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 DCLK1O15075 740 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 RARGP13631 454 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 OR1D2P34982 312 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 RPL3P39023 403 aaKnown RBP7.28□□□□□ -1.24
UPF2-203ENST00000397053 CASP9P55211 416 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 RBBP4Q09028 425 aa7.28□□□□□ -1.24
UPF2-203ENST00000397053 ILF3Q12906 894 aaKnown RBP eCLIP7.28□□□□□ -1.24
UPF2-203ENST00000397053 GRB14Q14449 540 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms