RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.28
AP1S3-202ENST00000396653 ZNF318Q5VUA4 2279 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 SGK1O00141 431 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 CST8O60676 142 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 ADAM23O75077 832 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 SRCP12931 536 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 KRT10P13645 584 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 HOXB2P14652 356 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 PRKCHP24723 683 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 STK19P49842 368 aaPredicted RBP16.76■□□□□ 0.27
AP1S3-202ENST00000396653 DNA2P51530 1060 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 GBE1Q04446 702 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 ZNF33AQ06730 810 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 MTAPQ13126 283 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 HNRNPA1L2Q32P51 320 aaKnown RBP16.76■□□□□ 0.27
AP1S3-202ENST00000396653 INO80DQ53TQ3 878 aaPredicted RBP16.76■□□□□ 0.27
AP1S3-202ENST00000396653 KAZNQ674X7 775 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 CCDC33Q8N5R6 958 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 DTWD2Q8NBA8 298 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 FATE1Q969F0 183 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 HDAC11Q96DB2 347 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 RPL10LQ96L21 214 aaKnown RBP16.76■□□□□ 0.27
AP1S3-202ENST00000396653 ZNF599Q96NL3 588 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 OLFM3Q96PB7 478 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 BRD8Q9H0E9 1235 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 FBRSQ9HAH7 460 aa16.76■□□□□ 0.27
AP1S3-202ENST00000396653 IPO11Q9UI26 975 aaKnown RBP16.76■□□□□ 0.27
AP1S3-202ENST00000396653 EDDM13A0A1B0GTR0 161 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 TARSL2A2RTX5 802 aaKnown RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 APOC4-APOC2K7ER74 178 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 TJP3O95049 919 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 CD160O95971 181 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 APOC2P02655 101 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 GARSP41250 739 aaKnown RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 DYNLT1P63172 113 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 SLC10A2Q12908 348 aaPredicted RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 ZNF211Q13398 564 aaPredicted RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 RFTN1Q14699 578 aaPredicted RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 STARD3Q14849 445 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 CRY1Q16526 586 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 TMCO4Q5TGY1 634 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 TP53INP2Q8IXH6 220 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 ATP11CQ8NB49 1132 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 FRS2Q8WU20 508 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 ISG20Q96AZ6 181 aaKnown RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 TSGA13Q96PP4 275 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 ZDHHC4Q9NPG8 344 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 PRMT8Q9NR22 394 aaPredicted RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 UBA2Q9UBT2 640 aaPredicted RBP16.75■□□□□ 0.27
AP1S3-202ENST00000396653 SLCO3A1Q9UIG8 710 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 CUL9Q8IWT3 2517 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 A0A0C4DFX4 3053 aa16.75■□□□□ 0.27
AP1S3-202ENST00000396653 A0A1W2PQF6 199 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 KCNK3O14649 394 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 PPP1R12AO14974 1030 aaPredicted RBP16.74■□□□□ 0.27
AP1S3-202ENST00000396653 MAFKO60675 156 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 MT-CO1P00395 513 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 EPHX1P07099 455 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 C7P10643 843 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 CXCL12P48061 93 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 NUMBP49757 651 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 DGKEP52429 567 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 GNG11P61952 73 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 ADCY2Q08462 1091 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 KLF1Q13351 362 aaPredicted RBP16.74■□□□□ 0.27
AP1S3-202ENST00000396653 CAMK2GQ13555 558 aaPredicted RBP16.74■□□□□ 0.27
AP1S3-202ENST00000396653 PDK1Q15118 436 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 DLG2Q15700 870 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 AADACL2Q6P093 401 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 C22orf39Q6P5X5 142 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 LINGO4Q6UY18 593 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 ARHGAP36Q6ZRI8 547 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 PLPP6Q8IY26 295 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 PCDH20Q8N6Y1 951 aaKnown RBP16.74■□□□□ 0.27
AP1S3-202ENST00000396653 P3H4Q92791 437 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 HERPUD2Q9BSE4 406 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 HEMGNQ9BXL5 484 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 POLMQ9NP87 494 aaPredicted RBP16.74■□□□□ 0.27
AP1S3-202ENST00000396653 SPATA6Q9NWH7 488 aaPredicted RBP16.74■□□□□ 0.27
AP1S3-202ENST00000396653 HEY1Q9Y5J3 304 aa16.74■□□□□ 0.27
AP1S3-202ENST00000396653 CACNA1IQ9P0X4 2223 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 TTC34A8MYJ7 566 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 WASH3PC4AMC7 463 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 J3KR12 359 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 SYNCRIPO60506 623 aaKnown RBP16.73■□□□□ 0.27
AP1S3-202ENST00000396653 HLA-EP13747 358 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 PECAM1P16284 738 aaPredicted RBP16.73■□□□□ 0.27
AP1S3-202ENST00000396653 CCNCP24863 283 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 HOXA6P31267 233 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 WASP42768 502 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 SATB1Q01826 763 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 PPIDQ08752 370 aaKnown RBP16.73■□□□□ 0.27
AP1S3-202ENST00000396653 NPNTQ6UXI9 565 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 TMEM92Q6UXU6 159 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 C1orf210Q8IVY1 113 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 CAMKK1Q8N5S9 505 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 TTC13Q8NBP0 860 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 NETO2Q8NC67 525 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms