RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ACSL6Q9UKU0 697 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 COQ4Q9Y3A0 265 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 PCDHGA7Q9Y5G6 932 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 AHCTF1Q8WYP5 2266 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 STX10O60499 249 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CTSLP07711 333 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 NUMBP49757 651 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 CCDC15Q0P6D6 951 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 ADAM9Q13443 819 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 UBAP2LQ14157 1087 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 NR0B2Q15466 257 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 ACCSLQ4AC99 568 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 TMEM259Q4ZIN3 620 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 KYAT3Q6YP21 454 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 Q6ZVU0 165 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 BEND5Q7L4P6 421 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 SH2D3CQ8N5H7 860 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 TMIEQ8NEW7 156 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 TFAP2BQ92481 460 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 LIN37Q96GY3 246 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
SCFD1-202ENST00000396629 BTN2A3PQ96KV6 586 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 ARHGAP9Q9BRR9 750 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 BOCQ9BWV1 1114 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 PCDHA7Q9UN72 937 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 NAALADL1Q9UQQ1 740 aa8.66□□□□□ -1.02
SCFD1-202ENST00000396629 BOD1L1Q8NFC6 3051 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 SPTY2D1-AS1A0A0U1RR47 76 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 H3BM21 787 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 AQP9O43315 295 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 IGLV3-25P01717 112 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 APOEP02649 317 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 PAEPP09466 180 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 SLC5A2P31639 672 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 RPL34P49207 117 aaKnown RBP8.65□□□□□ -1.02
SCFD1-202ENST00000396629 NUCB2P80303 420 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 EIF4EBP2Q13542 120 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-202ENST00000396629 CNGA2Q16280 664 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 ZCWPW2Q504Y3 356 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 ZC3H12AQ5D1E8 599 aaKnown RBP8.65□□□□□ -1.02
SCFD1-202ENST00000396629 TTC39BQ5VTQ0 682 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-202ENST00000396629 OR6B2Q6IFH4 312 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 TAC4Q86UU9 113 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 PPP1R9BQ96SB3 815 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 SRRTQ9BXP5 876 aaKnown RBP8.65□□□□□ -1.02
SCFD1-202ENST00000396629 KLF15Q9UIH9 416 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 OR51B4Q9Y5P0 310 aa8.65□□□□□ -1.02
SCFD1-202ENST00000396629 CLEC18AA5D8T8 446 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 POM121BA6NF01 834 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 TCAF2A6NFQ2 919 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 F5H5T6 163 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 NTN3O00634 580 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 RHOBTB3O94955 611 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 MYL1P05976 194 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 FAM87AP0C7U9 286 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CHRNA3P32297 505 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SRSF6Q13247 344 aaKnown RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 TBR1Q16650 682 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 DEFB133Q30KQ1 61 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SYPL2Q5VXT5 272 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SEL1L3Q68CR1 1132 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CRTC1Q6UUV9 634 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 PTAR1Q7Z6K3 402 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 C14orf80Q86SX3 495 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 PARGQ86W56 976 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CIR1Q86X95 450 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 ATP6V0D2Q8N8Y2 350 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CLEC18CQ8NCF0 446 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 OR52K2Q8NGK3 314 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 ZSWIM1Q9BR11 485 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 FEM1AQ9BSK4 669 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 HDAC8Q9BY41 377 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 MIS12Q9H081 205 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 KCNU1A8MYU2 1149 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 RNF103O00237 685 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 PLD2O14939 933 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CASC3O15234 703 aaKnown RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 PCDH8O95206 1070 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SRCP12931 536 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 UGT1A5P35504 534 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 RABIFP47224 123 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 RPIAP49247 311 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 TLE1Q04724 770 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 EIF3IQ13347 325 aaKnown RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 FGL2Q14314 439 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 DRAP1Q14919 205 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 STILQ15468 1287 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 TGIF1Q15583 401 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CBWD6Q4V339 395 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CBWD3Q5JTY5 395 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 RABGAP1LQ5R372 815 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 CBWD5Q5RIA9 395 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 ERN2Q76MJ5 926 aaKnown RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 GUF1Q8N442 669 aaKnown RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 FBXO39Q8N4B4 442 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 OR2A12Q8NGT7 310 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms