RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 UBXN10Q96LJ8 280 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.49□□□□□ -1.69
CMC1-202ENST00000396610 MROH8Q9H579 483 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 RIC8AQ9NPQ8 531 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 RNF146Q9NTX7 359 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 ZDHHC7Q9NXF8 308 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 PLEKHB1Q9UF11 243 aaPredicted RBP4.49□□□□□ -1.69
CMC1-202ENST00000396610 CD207Q9UJ71 328 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 OSGIN2Q9Y236 505 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 SQORQ9Y6N5 450 aa4.49□□□□□ -1.69
CMC1-202ENST00000396610 CACNA1IQ9P0X4 2223 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.48□□□□□ -1.69
CMC1-202ENST00000396610 TMEM247A6NEH6 219 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 B4DGG1 531 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 H0YGN5 161 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TMCC1O94876 653 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 CBX6O95503 412 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 IFNA2P01563 188 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 WEE2P0C1S8 567 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 CNTFP26441 200 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 CCR5P51681 352 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 PKP1Q13835 747 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TMEM95Q3KNT9 176 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 SYTL3Q4VX76 610 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TBC1D9BQ66K14 1250 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 AWAT2Q6E213 333 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 AADACL2Q6P093 401 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 CYP26C1Q6V0L0 522 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TRIM74Q86UV6 250 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TRIM73Q86UV7 250 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 PIM3Q86V86 326 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 WDR5BQ86VZ2 330 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 ZNF354CQ86Y25 554 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 NCSTNQ92542 709 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 STAMQ92783 540 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 INPP5DQ92835 1189 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 REEP2Q9BRK0 252 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 FAM234AQ9H0X4 552 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 CXorf56Q9H5V9 222 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TASP1Q9H6P5 420 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 FZD3Q9NPG1 666 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 TBC1D14Q9P2M4 693 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 DHDHQ9UQ10 334 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 RAP2CQ9Y3L5 183 aa4.48□□□□□ -1.69
CMC1-202ENST00000396610 ARID4BQ4LE39 1312 aaPredicted RBP4.47□□□□□ -1.69
CMC1-202ENST00000396610 TARSL2A2RTX5 802 aaKnown RBP4.47□□□□□ -1.69
CMC1-202ENST00000396610 ANP32CO43423 234 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 UNGP13051 313 aaPredicted RBP4.47□□□□□ -1.69
CMC1-202ENST00000396610 HNF1BP35680 557 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 SKIV2L2P42285 1042 aaKnown RBP4.47□□□□□ -1.69
CMC1-202ENST00000396610 CCT4P50991 539 aaKnown RBP4.47□□□□□ -1.69
CMC1-202ENST00000396610 CLCNKBP51801 687 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 UBE3AQ05086 875 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 RAPGEF1Q13905 1077 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 ATG16L1Q676U5 607 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 NAPEPLDQ6IQ20 393 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 GJB7Q6PEY0 223 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 FAM217AQ8IXS0 508 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 FAM185AQ8N0U4 392 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 USP38Q8NB14 1042 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 KDM1BQ8NB78 822 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 SETD9Q8NE22 299 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 HDAC7Q8WUI4 952 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 LPAR1Q92633 364 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 TEFMQ96QE5 360 aaKnown RBP4.47□□□□□ -1.69
CMC1-202ENST00000396610 B3GNT4Q9C0J1 378 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 LMAN2LQ9H0V9 348 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 CDH22Q9UJ99 828 aa4.47□□□□□ -1.69
CMC1-202ENST00000396610 OR6C68A6NDL8 312 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 PLEKHD1A6NEE1 506 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 DDTLA6NHG4 134 aaPredicted RBP4.46□□□□□ -1.7
CMC1-202ENST00000396610 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 FAM90A7PA6NKC0 464 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 FAM90A22PA8MWA6 464 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 FAM90A12PA8MX19 464 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 FAM90A23PA8MXZ1 464 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 NCAM2O15394 837 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 TSPAN3O60637 253 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 HOXB2P14652 356 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 SCP2P22307 547 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 MAPK9P45984 424 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 POLD2P49005 469 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 P2RX3P56373 397 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 TWIST1Q15672 202 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 RPE65Q16518 533 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 FBXO43Q4G163 708 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 TMEM71Q6P5X7 295 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 PARM1Q6UWI2 310 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 BBS12Q6ZW61 710 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 GHDCQ8N2G8 530 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 HORMAD2Q8N7B1 307 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 ASB5Q8WWX0 329 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 ZBTB9Q96C00 473 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 WDR77Q9BQA1 342 aaPredicted RBP4.46□□□□□ -1.7
CMC1-202ENST00000396610 NPLQ9BXD5 320 aaPredicted RBP4.46□□□□□ -1.7
CMC1-202ENST00000396610 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 TTC12Q9H892 705 aaPredicted RBP4.46□□□□□ -1.7
CMC1-202ENST00000396610 SIRT3Q9NTG7 399 aaPredicted RBP4.46□□□□□ -1.7
CMC1-202ENST00000396610 GGA3Q9NZ52 723 aa4.46□□□□□ -1.7
CMC1-202ENST00000396610 NLKQ9UBE8 527 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms