RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CRYL1Q9Y2S2 319 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 PGM3O95394 542 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ST3GAL1Q11201 340 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 RALGDSQ12967 914 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ACOX1Q15067 660 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 PREPLQ4J6C6 727 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 AGMOQ6ZNB7 445 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FBXW8Q8N3Y1 598 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FAM81AQ8TBF8 368 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 KLHL32Q96NJ5 620 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 IL22Q9GZX6 179 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 PNPLA3Q9NST1 481 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 SNX6Q9UNH7 406 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 MTF2Q9Y483 593 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 CNTNAP2Q9UHC6 1331 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 CRELD2Q6UXH1 353 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 CDHR5Q9HBB8 845 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FKBP14Q9NWM8 211 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 RAB21Q9UL25 225 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FAM25EA8MYX2 175 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 VAPBO95292 243 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FAM153BP0C7A2 387 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 S100A1P23297 94 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FAM153CQ494X1 144 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 DENND5AQ6IQ26 1287 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ARHGAP20Q9P2F6 1191 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 MICAL2O94851 1124 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 DBTP11182 482 aaKnown RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 RNF43Q68DV7 783 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 BICRALQ6AI39 1079 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF720Q7Z2F6 126 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 CEP41Q9BYV8 373 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ASTN2O75129 1339 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 MYH3P11055 1940 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 RBAK-RBAKDNI3L0D1 243 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 CDC25CP30307 473 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 SMIM11AP58511 58 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ZIK1Q3SY52 487 aaPredicted RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 C5orf22Q49AR2 442 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ISLR2Q6UXK2 745 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 TFAP2DQ7Z6R9 452 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 GORASP1Q9BQQ3 440 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 PCDHA11Q9Y5I1 949 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 HOXA2O43364 376 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FAAP100Q0VG06 881 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 TRIM28Q13263 835 aaKnown RBP14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ULK3Q6PHR2 472 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ARHGAP36Q6ZRI8 547 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ERN1O75460 977 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 VTNP04004 478 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 MYL6P60660 151 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 SGCGQ13326 291 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 PFKFB4Q16877 469 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 YTHDF3Q7Z739 585 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 ARL15Q9NXU5 204 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 PFDN2Q9UHV9 154 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 WEE1P30291 646 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 FMO4P31512 558 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 RPS6KA3P51812 740 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 R3HCC1LQ7Z5L2 792 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 PIWIL2Q8TC59 973 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CRAMP1Q96RY5 1269 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 TBCBQ99426 244 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CLK4Q9HAZ1 481 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 PIH1D1Q9NWS0 290 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF70Q9UC06 446 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 RPLP2P05387 115 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CYP2B6P20813 491 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 TBX4P57082 545 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 POLR2LP62875 67 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 ACSL4O60488 711 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 FAUP35544 74 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 MAPK9P45984 424 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 LSM3P62310 102 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 TAS1R2Q8TE23 839 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 KAT5Q92993 513 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 PGM2Q96G03 612 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 SUPT20HL2P0C7V6 817 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CYP2A6P11509 494 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 DNAJB2P25686 324 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 DHDDSQ86SQ9 333 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 LZTR1Q8N653 840 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 GIPC3Q8TF64 312 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 POP5Q969H6 163 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CELF6Q96J87 481 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CLIC5Q9NZA1 410 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 TSPAN16Q9UKR8 245 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 RGSL1A5PLK6 1076 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 MTA2O94776 668 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 PIGNO95427 931 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 URODP06132 367 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 CBWD6Q4V339 395 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 ESRP1Q6NXG1 681 aaKnown RBP14.15□□□□□ -0.14
COL4A3-202ENST00000396578 RMI1Q9H9A7 625 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms