RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 BBS2Q9BXC9 721 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 ACE2Q9BYF1 805 aaPredicted RBP20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 ZNF446Q9NWS9 450 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 ATP8A1Q9Y2Q0 1164 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 NEDD8-MDP1E9PL57 170 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 MZF1P28698 734 aaPredicted RBP20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 CSKP41240 450 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 MAGEA6P43360 314 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 SLC10A7Q0GE19 358 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 SLMAPQ14BN4 828 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 PPP1R21Q6ZMI0 780 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 LEKR1Q6ZMV7 388 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 CEP128Q6ZU80 1094 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 ADGRG2Q8IZP9 1017 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 FIBINQ8TAL6 211 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 OSCP1Q8WVF1 389 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 ZNF599Q96NL3 588 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 FEM1AQ9BSK4 669 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 TRPV4Q9HBA0 871 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 PDFQ9HBH1 243 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 DNAJC17Q9NVM6 304 aaKnown RBP20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 OBP2AQ9NY56 170 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 KIAA1522Q9P206 1035 aaPredicted RBP20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 VPS28Q9UK41 221 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 REV3LO60673 3130 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 HEPACAM2A8MVW5 462 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 CBX4O00257 560 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 PPFIA2O75334 1257 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 HLA-DQB2P05538 268 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 TPSB2P20231 275 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 GBP2P32456 591 aaPredicted RBP20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 HSPA9P38646 679 aaKnown RBP20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 MMP13P45452 471 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 IFNAR2P48551 515 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 LBRQ14739 615 aaKnown RBP20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 CASP8Q14790 479 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 TPSAB1Q15661 275 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 LY6G5CQ5SRR4 150 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 TMCO4Q5TGY1 634 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 RNF43Q68DV7 783 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 MREGQ8N565 214 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 ZNF419Q96HQ0 510 aaPredicted RBP20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 LRCH3Q96II8 777 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 MSLNLQ96KJ4 702 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 ZFP14Q9HCL3 533 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 CLEC4EQ9ULY5 219 aa20.81■□□□□ 0.92
VCPKMT-202ENST00000395860 PENKP01210 267 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 GLDCP23378 1020 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 ARL4CP56559 192 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 GAD2Q05329 585 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 PRPSAP1Q14558 356 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 COL19A1Q14993 1142 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 OTOP3Q7RTS5 596 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 TEX26Q8N6G2 289 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 PDCD7Q8N8D1 485 aaKnown RBP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 MYADMQ96S97 322 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 RBM15Q96T37 977 aaKnown RBP eCLIP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 FUT8Q9BYC5 575 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 GLOD4Q9HC38 313 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 NT5MQ9NPB1 228 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 UBA2Q9UBT2 640 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 KIF26AQ9ULI4 1882 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 TYRP14679 529 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 PMS2P54278 862 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 LMAN2Q12907 356 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 HIF1AQ16665 826 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 CENPUQ71F23 418 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 BBS5Q8N3I7 341 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 E2F7Q96AV8 911 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 TXLNGYQ9BZA5 131 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 POMKQ9H5K3 350 aa20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 EIF2B3Q9NR50 452 aaKnown RBP20.8■□□□□ 0.92
VCPKMT-202ENST00000395860 GOLGA6CA6NDK9 693 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 GOLGA6BA6NDN3 693 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 GOLGA6DP0CG33 693 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 FCARP24071 287 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 SARNPP82979 210 aaKnown RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 ITKQ08881 620 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 ZNF235Q14590 738 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 TANGO2Q6ICL3 276 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 ZNF557Q8N988 423 aaPredicted RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 TSEN2Q8NCE0 465 aaKnown RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 MCUQ8NE86 351 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 ST13P5Q8NFI4 369 aaPredicted RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 UBLCP1Q8WVY7 318 aaPredicted RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 ALG14Q96F25 216 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 FCRL5Q96RD9 977 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 FRMD8Q9BZ67 464 aaPredicted RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 THG1LQ9NWX6 298 aaKnown RBP20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 GOLGA6AQ9NYA3 693 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 MARK1Q9P0L2 795 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 OR51B4Q9Y5P0 310 aa20.79■□□□□ 0.92
VCPKMT-202ENST00000395860 TRIOBPQ9H2D6 2365 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 CACNG3O60359 315 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 CD70P32970 193 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 ARF5P84085 180 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 CDK16Q00536 496 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 DHCR24Q15392 516 aa20.78■□□□□ 0.92
VCPKMT-202ENST00000395860 EML3Q32P44 896 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms