RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZNF787Q6DD87 383 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 RNF139Q8WU17 664 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 FCRL2Q96LA5 508 aaPredicted RBP14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 IL12RB2Q99665 862 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 EPAS1Q99814 870 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 STRADBQ9C0K7 418 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 TCEAL2Q9H3H9 227 aaPredicted RBP14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 ABCC13Q9NSE7 274 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 PISDQ9UG56 409 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 LOXL2Q9Y4K0 774 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 HIVEP1P15822 2718 aa14.06□□□□□ -0.16
VCPKMT-201ENST00000395859 LMO7DNF2Z398 122 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 RAD51BO15315 384 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 EXOC3O60645 756 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 MOCS3O95396 460 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 JUNDP17535 347 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 ELAVL4P26378 380 aaKnown RBP14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 TNFRSF8P28908 595 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 RPIAP49247 311 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 ARSDP51689 593 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 FAM26FQ5R3K3 315 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 RNF219Q5W0B1 726 aaPredicted RBP14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 PTAR1Q7Z6K3 402 aaPredicted RBP14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 NELFCDQ8IXH7 590 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 CFAP52Q8N1V2 620 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 LMX1AQ8TE12 382 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 ALG14Q96F25 216 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 SLC39A13Q96H72 371 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 TBATAQ96M53 351 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 KLF6Q99612 283 aaPredicted RBP14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 SRRTQ9BXP5 876 aaKnown RBP14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 ZNF71Q9NQZ8 489 aaPredicted RBP14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 PADI4Q9UM07 663 aa14.05□□□□□ -0.16
VCPKMT-201ENST00000395859 C1QTNF3-AMACRE9PGA6 284 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 IKBKBO14920 756 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 XPO1O14980 1071 aaKnown RBP14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 GABBR2O75899 941 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 CLSTN1O94985 981 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 JMJD7P0C870 316 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 CD58P19256 250 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 GJB2P29033 226 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 STAT6P42226 847 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 UQCRFS1P47985 274 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 RAD23BP54727 409 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 OXCT1P55809 520 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 DAOAP59103 153 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 CCL7P80098 99 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 SULT2A1Q06520 285 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 ADIGQ0VDE8 80 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 SLC12A1Q13621 1099 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 CAPRIN2Q6IMN6 1127 aaKnown RBP14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 ATCAYQ86WG3 371 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 RBFAQ8N0V3 343 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 C9orf43Q8TAL5 461 aaPredicted RBP14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 SSC4DQ8WTU2 575 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 USP7Q93009 1102 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 PPP1R13BQ96KQ4 1090 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 NIF3L1Q9GZT8 377 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 CLPBQ9H078 707 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 TNMDQ9H2S6 317 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 ZNF768Q9H5H4 540 aaKnown RBP14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 CLIC4Q9Y696 253 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 MTORP42345 2549 aa14.04□□□□□ -0.16
VCPKMT-201ENST00000395859 YY2O15391 372 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 DCTP40126 519 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 NNMTP40261 264 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 RABIFP47224 123 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 PFN3P60673 137 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 BECN1Q14457 450 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 E2F4Q16254 413 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 ZNF394Q53GI3 561 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 Q6ZVU0 165 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 SLC9A9Q8IVB4 645 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 TMC2Q8TDI7 906 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 ERCC4Q92889 916 aaPredicted RBP14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 GLMNQ92990 594 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 TATDN2Q93075 761 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 NKD1Q969G9 470 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 TMEM159Q96B96 161 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 HEXIM2Q96MH2 286 aaKnown RBP14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 TMEM74Q96NL1 305 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 GFM1Q96RP9 751 aaKnown RBP14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 DDX50Q9BQ39 737 aaKnown RBP14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 LRRC61Q9BV99 259 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 XPO7Q9UIA9 1087 aaKnown RBP14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 NAALADL1Q9UQQ1 740 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 PCDHB11Q9Y5F2 797 aa14.03□□□□□ -0.16
VCPKMT-201ENST00000395859 TYW5A2RUC4 315 aaKnown RBP14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 AGFG2O95081 481 aa14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 ADKP55263 362 aaKnown RBP14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 TBX4P57082 545 aa14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 PDE1CQ14123 709 aaPredicted RBP14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 DLG2Q15700 870 aa14.02□□□□□ -0.17
VCPKMT-201ENST00000395859 KRTAP21-3Q3LHN1 58 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms