RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 EPCAMP16422 314 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 PFKLP17858 780 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 HOXC13P31276 330 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 DRG2P55039 364 aaKnown RBP11.73□□□□□ -0.53
RTN1-203ENST00000395090 VCPP55072 806 aaKnown RBP11.73□□□□□ -0.53
RTN1-203ENST00000395090 DYNLT1P63172 113 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 COG7P83436 770 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 SLC7A5Q01650 507 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 OTUD4Q01804 1114 aaKnown RBP11.73□□□□□ -0.53
RTN1-203ENST00000395090 SNX1Q13596 522 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 PAFAH1B3Q15102 231 aaKnown RBP11.73□□□□□ -0.53
RTN1-203ENST00000395090 DUSP6Q16828 381 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 SYDE1Q6ZW31 735 aaPredicted RBP11.73□□□□□ -0.53
RTN1-203ENST00000395090 UNC45BQ8IWX7 931 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 TRIM42Q8IWZ5 723 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 GRIN3AQ8TCU5 1115 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.73□□□□□ -0.53
RTN1-203ENST00000395090 P3H4Q92791 437 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 ZDHHC7Q9NXF8 308 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 RASAL2Q9UJF2 1139 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 DNPEPQ9ULA0 475 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 NEU3Q9UQ49 428 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 HCFC2Q9Y5Z7 792 aa11.73□□□□□ -0.53
RTN1-203ENST00000395090 DCLK1O15075 740 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 CCL16O15467 120 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 CREB3O43889 395 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 RFPL2O75678 378 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 LRIG2O94898 1065 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 FGF19O95750 216 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 APOEP02649 317 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 PTPN2P17706 415 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 MAOBP27338 520 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 GABRR2P28476 465 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 MRPS25P82663 173 aaKnown RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 SLC10A2Q12908 348 aaPredicted RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 XRCC4Q13426 336 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 MS4A13Q5J8X5 152 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 SNAP47Q5SQN1 464 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 NUGGCQ68CJ6 796 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 NCBP2-AS2Q69YL0 99 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 ADGRD2Q7Z7M1 963 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 ZNF683Q8IZ20 524 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 ATP6V0D2Q8N8Y2 350 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 GRK7Q8WTQ7 553 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 CDCA3Q99618 268 aaPredicted RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 PRMT1Q99873 361 aaKnown RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 FAM118BQ9BPY3 351 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 ERP44Q9BS26 406 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 MIR1-1HGQ9H1L0 117 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 TLE6Q9H808 572 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 ETNK2Q9NVF9 386 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 DNMT3BQ9UBC3 853 aaKnown RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
RTN1-203ENST00000395090 HS3ST4Q9Y661 456 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 TRANK1O15050 2925 aa11.72□□□□□ -0.53
RTN1-203ENST00000395090 IGLV3-10A0A075B6K4 115 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 HEXIM1O94992 359 aaKnown RBP11.71□□□□□ -0.53
RTN1-203ENST00000395090 CSPG5O95196 566 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 ERCC2P18074 760 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 HDCP19113 662 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 CDC25CP30307 473 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 KCNQ1P51787 676 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 TPI1P60174 286 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 PIK3R6Q5UE93 754 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 DUPD1Q68J44 220 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 FBXL19Q6PCT2 694 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 JAMLQ86YT9 394 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 IFT20Q8IY31 132 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 EIF1ADQ8N9N8 165 aaKnown RBP11.71□□□□□ -0.53
RTN1-203ENST00000395090 LEMD2Q8NC56 503 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 ANKRD7Q92527 254 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 TIFAQ96CG3 184 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 CYP2S1Q96SQ9 504 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 SIK2Q9H0K1 926 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 ASAH2Q9NR71 780 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 PPARGC1AQ9UBK2 798 aaKnown RBP11.71□□□□□ -0.53
RTN1-203ENST00000395090 SNX10Q9Y5X0 201 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 RAD54BQ9Y620 910 aa11.71□□□□□ -0.53
RTN1-203ENST00000395090 ANAPC1Q9H1A4 1944 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 DRGXA6NNA5 263 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 WASH4PA8MWX3 477 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 DAPK3O43293 454 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 ADAM11O75078 769 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 STC2O76061 302 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 ECEL1O95672 775 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 GAS8O95995 478 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 KLKB1P03952 638 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 H2AFXP16104 143 aaPredicted RBP11.71□□□□□ -0.54
RTN1-203ENST00000395090 MCM3P25205 808 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 TNFRSF8P28908 595 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.54
RTN1-203ENST00000395090 HARS2P49590 506 aaKnown RBP11.71□□□□□ -0.54
RTN1-203ENST00000395090 EIF3EP60228 445 aaKnown RBP11.71□□□□□ -0.54
RTN1-203ENST00000395090 VSNL1P62760 191 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 SLC7A9P82251 487 aa11.71□□□□□ -0.54
RTN1-203ENST00000395090 GUCY2DQ02846 1103 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms