RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DFFAO00273 331 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 KDELR3O43731 214 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 BCKDHBP21953 392 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 MARCKSL1P49006 195 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 PAPOLAP51003 745 aaKnown RBP20.33■□□□□ 0.84
SNCA-203ENST00000394986 NDST2P52849 883 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 RPS14P62263 151 aaKnown RBP20.33■□□□□ 0.84
SNCA-203ENST00000394986 MAP7D1Q3KQU3 841 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 USP39Q53GS9 565 aaKnown RBP20.33■□□□□ 0.84
SNCA-203ENST00000394986 AFMIDQ63HM1 303 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 C22orf39Q6P5X5 142 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 TMCO3Q6UWJ1 677 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 ARHGAP36Q6ZRI8 547 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 CEP68Q76N32 757 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 DAAM2Q86T65 1068 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 PRCCQ92733 491 aaPredicted RBP20.33■□□□□ 0.84
SNCA-203ENST00000394986 FAM129BQ96TA1 746 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 ZNF670Q9BS34 389 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 EPC1Q9H2F5 836 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 RCOR3Q9P2K3 495 aaPredicted RBP20.33■□□□□ 0.84
SNCA-203ENST00000394986 HPCAL4Q9UM19 191 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 CKAP5Q14008 2032 aa20.33■□□□□ 0.84
SNCA-203ENST00000394986 VPS13AQ96RL7 3174 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 TARSL2A2RTX5 802 aaKnown RBP20.32■□□□□ 0.84
SNCA-203ENST00000394986 J3KR12 359 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 KDELR1P24390 212 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 P2RY2P41231 377 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 KIF5AQ12840 1032 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 SIM2Q14190 667 aaPredicted RBP20.32■□□□□ 0.84
SNCA-203ENST00000394986 PDK2Q15119 407 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 ANKRD20A8PQ5CZ79 823 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 LRRC38Q5VT99 294 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 MMAAQ8IVH4 418 aaKnown RBP20.32■□□□□ 0.84
SNCA-203ENST00000394986 RHOT1Q8IXI2 618 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 PCDH19Q8TAB3 1148 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 RSPH9Q9H1X1 276 aaPredicted RBP20.32■□□□□ 0.84
SNCA-203ENST00000394986 DONSONQ9NYP3 566 aa20.32■□□□□ 0.84
SNCA-203ENST00000394986 MBD1Q9UIS9 605 aaPredicted RBP20.32■□□□□ 0.84
SNCA-203ENST00000394986 GRID2IPA4D2P6 1211 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 C3orf70A6NLC5 250 aaPredicted RBP20.31■□□□□ 0.84
SNCA-203ENST00000394986 ZNF821O75541 412 aaPredicted RBP20.31■□□□□ 0.84
SNCA-203ENST00000394986 CNR2P34972 360 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 PSMD8P48556 350 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 CLCN6P51797 869 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 GSE1Q14687 1217 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 ZNF776Q68DI1 518 aaPredicted RBP20.31■□□□□ 0.84
SNCA-203ENST00000394986 KBTBD6Q86V97 674 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 RNF25Q96BH1 459 aaPredicted RBP20.31■□□□□ 0.84
SNCA-203ENST00000394986 FBRSQ9HAH7 460 aa20.31■□□□□ 0.84
SNCA-203ENST00000394986 SMG5Q9UPR3 1016 aaKnown RBP20.31■□□□□ 0.84
SNCA-203ENST00000394986 IGHV1OR15-9A0A0B4J2B8 117 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 ARHGAP42A6NI28 874 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 MFSD11O43934 449 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 DNA2P51530 1060 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 METAP1P53582 386 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 SLC20A2Q08357 652 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 NCBP2-AS2Q69YL0 99 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 MAP7D3Q8IWC1 876 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 LZTR1Q8N653 840 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 PQLC3Q8N755 202 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 SUMF1Q8NBK3 374 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 CHST14Q8NCH0 376 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 OR2A12Q8NGT7 310 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 KRT35Q92764 455 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 NKD2Q969F2 451 aaPredicted RBP20.3■□□□□ 0.84
SNCA-203ENST00000394986 FAF2Q96CS3 445 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 TM6SF2Q9BZW4 377 aa20.3■□□□□ 0.84
SNCA-203ENST00000394986 USP36Q9P275 1121 aaKnown RBP20.3■□□□□ 0.84
SNCA-203ENST00000394986 PROB1E7EW31 1015 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 MID1O15344 667 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 PSTPIP1O43586 416 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 PRAMEF11O60813 436 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 TMCC1O94876 653 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 MAP3K6O95382 1288 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 ACADMP11310 421 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 TPMTP51580 245 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 ELAVL3Q14576 367 aaKnown RBP20.29■□□□□ 0.84
SNCA-203ENST00000394986 CST6Q15828 149 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 MFSD7Q6UXD7 560 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 FAM124AQ86V42 546 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 TXLNBQ8N3L3 684 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 LRRC57Q8N9N7 239 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 OR8D1Q8WZ84 308 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 SPACA7Q96KW9 195 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 PDFQ9HBH1 243 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 DDX56Q9NY93 547 aaKnown RBP20.29■□□□□ 0.84
SNCA-203ENST00000394986 SERGEFQ9UGK8 458 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 FANCMQ8IYD8 2048 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 EML5Q05BV3 1969 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 USP34Q70CQ2 3546 aa20.29■□□□□ 0.84
SNCA-203ENST00000394986 GPR179Q6PRD1 2367 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 ZSCAN5CA6NGD5 496 aaPredicted RBP20.28■□□□□ 0.84
SNCA-203ENST00000394986 RNF103O00237 685 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 RNASEH1O60930 286 aaKnown RBP20.28■□□□□ 0.84
SNCA-203ENST00000394986 ZNF217O75362 1048 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 PALMO75781 387 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 IL1BP01584 269 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 DNTTP04053 509 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 CTSLP07711 333 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 GEMIN4P57678 1058 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms