RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TXNDC16Q9P2K2 825 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 MARCOQ9UEW3 520 aaPredicted RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 SLC2A6Q9UGQ3 507 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 FAM92AA1XBS5 289 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 ERI2A8K979 691 aaKnown RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 GJB3O75712 270 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 PEX11BO96011 259 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 TYK2P29597 1187 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 GP5P40197 560 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 NPY2RP49146 381 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 RPL10AP62906 217 aaKnown RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 SLC10A7Q0GE19 358 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 FYB2Q5VWT5 728 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 FSTL4Q6MZW2 842 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 KCNMB4Q86W47 210 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 LZTR1Q8N653 840 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 C1orf74Q96LT6 269 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 TMEM237Q96Q45 408 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 FCRL5Q96RD9 977 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 TBL1YQ9BQ87 522 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 TTPALQ9BTX7 342 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 VN1R3Q9BXE9 311 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 PRDM5Q9NQX1 630 aaPredicted RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 TMEM216Q9P0N5 145 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 NYNRINQ9P2P1 1898 aaKnown RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 CBX6O95503 412 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 BPGMP07738 259 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 HSF5Q4G112 596 aaPredicted RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 TAF1BQ53T94 588 aaPredicted RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 NAPEPLDQ6IQ20 393 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ESRP1Q6NXG1 681 aaKnown RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 FAM117BQ6P1L5 589 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ZNF449Q6P9G9 518 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ATG14Q6ZNE5 492 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 CFAP52Q8N1V2 620 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 SLC25A41Q8N5S1 370 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 FBXO22Q8NEZ5 403 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 PSMG2Q969U7 264 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 PABPC5Q96DU9 382 aaKnown RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 PLCD4Q9BRC7 762 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 IL22Q9GZX6 179 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 TLR8Q9NR97 1041 aaKnown RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 SNX15Q9NRS6 342 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 KLC4Q9NSK0 619 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 HAO1Q9UJM8 370 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 SOX13Q9UN79 622 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 DLDP09622 509 aaKnown RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 T-ENOLP0DO92 83 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.04
GPC3-202ENST00000394299 SAT1P21673 171 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 OR1D2P34982 312 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 IRF9Q00978 393 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ITKQ08881 620 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 NADSYN1Q6IA69 706 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 CYB5D1Q6P9G0 228 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 KLHL29Q96CT2 875 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 MRGPRX2Q96LB1 330 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 RBBP8Q99708 897 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 CPNE1Q99829 537 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 TRIM55Q9BYV6 548 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ZYG11BQ9C0D3 744 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 NT5MQ9NPB1 228 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 FBXO6Q9NRD1 293 aaPredicted RBP15.33■□□□□ 0.04
GPC3-202ENST00000394299 MKS1Q9NXB0 559 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 SIRPGQ9P1W8 387 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 HEY2Q9UBP5 337 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ACTL7AQ9Y615 435 aa15.33■□□□□ 0.04
GPC3-202ENST00000394299 ITM2AO43736 263 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 TLR5O60602 858 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 LYPLA1O75608 230 aaPredicted RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 CNTFP26441 200 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ETFBP38117 255 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ELF3P78545 371 aaPredicted RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 SETDB1Q15047 1291 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 FASTKD1Q53R41 847 aaKnown RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 RFWD3Q6PCD5 774 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 TNS4Q8IZW8 715 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 SPPL2BQ8TCT7 592 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 RPRD1AQ96P16 312 aaPredicted RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 TMEM120AQ9BXJ8 343 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 AAR2Q9Y312 384 aaKnown RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 SLC38A8A6NNN8 435 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 NEBLO76041 1014 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 GABRB3P28472 473 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ADRA1AP35348 466 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ACVRL1P37023 503 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ARFIP2P53365 341 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ZNF33AQ06730 810 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 TRIP4Q15650 581 aaPredicted RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 GRTP1Q5TC63 336 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 DENND6AQ8IWF6 608 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 MOCOSQ96EN8 888 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 PAK6Q9NQU5 681 aaPredicted RBP15.32■□□□□ 0.04
GPC3-202ENST00000394299 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
GPC3-202ENST00000394299 A8MUI8 341 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 PLIN3O60664 434 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 VAPBO95292 243 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms