RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CCDC114Q96M63 670 aa19.4■□□□□ 0.7
PDLIM7-204ENST00000393546 CSPG4P5Q96PW8 444 aa19.4■□□□□ 0.7
PDLIM7-204ENST00000393546 DUSP15Q9H1R2 295 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-204ENST00000393546 RCOR3Q9P2K3 495 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-204ENST00000393546 SCML1Q9UN30 329 aa19.4■□□□□ 0.7
PDLIM7-204ENST00000393546 IGHV1OR15-9A0A0B4J2B8 117 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 ARHGAP42A6NI28 874 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 BUB1O43683 1085 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 BNIP3LO60238 219 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 GFRA3O60609 400 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 VAV1P15498 845 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 SERPINH1P50454 418 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 TPMTP51580 245 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 VAV2P52735 878 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 SERINC3Q13530 473 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 Q6ZVU0 165 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 DSG4Q86SJ6 1040 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 KIAA1328Q86T90 577 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 CACUL1Q86Y37 369 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 MMAAQ8IVH4 418 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 FRMD1Q8N878 549 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 CELF6Q96J87 481 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 LOXL4Q96JB6 756 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 CEP44Q9C0F1 390 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 SLC39A8Q9C0K1 460 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 LRRC19Q9H756 370 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 USP36Q9P275 1121 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 MBD1Q9UIS9 605 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 REXO2Q9Y3B8 237 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 ZFHX2Q9C0A1 2572 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 ABCA7Q8IZY2 2146 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 SPAG17Q6Q759 2223 aa19.39■□□□□ 0.69
PDLIM7-204ENST00000393546 MCF2LO15068 1137 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 SPOPO43791 374 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 BCKDHBP21953 392 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 COMTP21964 271 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 RECQLP46063 649 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 MRE11P49959 708 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 PAPOLAP51003 745 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 ARSEP51690 589 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 NAP1L1P55209 391 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 CST6Q15828 149 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 TTC31Q49AM3 519 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 LRRC38Q5VT99 294 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 C22orf39Q6P5X5 142 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 TMCO3Q6UWJ1 677 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 LPCAT2Q7L5N7 544 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 SDK1Q7Z5N4 2213 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 ALYREFQ86V81 257 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 CASKIN2Q8WXE0 1202 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 TSC1Q92574 1164 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 CALN1Q9BXU9 219 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 KLC2Q9H0B6 622 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 NCDNQ9UBB6 729 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 GMEB2Q9UKD1 530 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 NCKAP1Q9Y2A7 1128 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 ALG6Q9Y672 507 aa19.38■□□□□ 0.69
PDLIM7-204ENST00000393546 RCCD1A6NED2 376 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 BTNL10A8MVZ5 291 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 ALOX15BO15296 676 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 PJA2O43164 708 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 BUB1BO60566 1050 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 NDUFS2O75306 463 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 CD160O95971 181 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 ADH1BP00325 375 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 IL1BP01584 269 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 CD48P09326 243 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 IL4RP24394 825 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 CD6P30203 668 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 SLC8A1P32418 973 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 DNA2P51530 1060 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 RPL6Q02878 288 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 MMRN1Q13201 1228 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 DPYSL3Q14195 570 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 ODF2Q5BJF6 829 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 SPDYCQ5MJ68 293 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 FAM46CQ5VWP2 391 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 AFMIDQ63HM1 303 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 LEKR1Q6ZMV7 388 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 RHOT1Q8IXI2 618 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 PCDH20Q8N6Y1 951 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 CCDC112Q8NEF3 446 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 GANCQ8TET4 914 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 RUBCNQ92622 972 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 ISG20Q96AZ6 181 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 TNKS2Q9H2K2 1166 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 PABPC3Q9H361 631 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 CD93Q9NPY3 652 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 ETNK2Q9NVF9 386 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 WSB2Q9NYS7 404 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 FCF1Q9Y324 198 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 ACTL7AQ9Y615 435 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 THADAQ6YHU6 1953 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 PLXND1Q9Y4D7 1925 aa19.37■□□□□ 0.69
PDLIM7-204ENST00000393546 DFFAO00273 331 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 MID1O15344 667 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 IGLV3-19P01714 112 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 RETP07949 1114 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 TNNT1P13805 278 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 C5AR1P21730 350 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms