RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ASIC4Q96FT7 647 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 METTL2AQ96IZ6 378 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 AMNQ9BXJ7 453 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 INTS2Q9H0H0 1204 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 RBM38Q9H0Z9 239 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 IFT22Q9H7X7 185 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SSU72Q9NP77 194 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 DNAJC11Q9NVH1 559 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SCN3BQ9NY72 215 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 XPO7Q9UIA9 1087 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 MID2Q9UJV3 735 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CFL2Q9Y281 166 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PCDHA3Q9Y5H8 950 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 MYH2Q9UKX2 1941 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CROCCQ5TZA2 2017 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 HDAC3O15379 428 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SRP72O76094 671 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 NOL4O94818 638 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 NPPAP01160 153 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CD4P01730 458 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 RALBP11234 206 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PCNAP12004 261 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 UBE3AQ05086 875 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TNFAIP1Q13829 316 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PRKD1Q15139 912 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 MTERF2Q49AM1 385 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 DSG4Q86SJ6 1040 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SNX29P2Q8IUI4 249 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PARP8Q8N3A8 854 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 AMER2Q8N7J2 671 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PNPT1Q8TCS8 783 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 DENND1AQ8TEH3 1009 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 DPP3Q9NY33 737 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SUCOQ9UBS9 1254 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 LOC105371267A0A1B0GV96 52 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 OR6C70A6NIJ9 312 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SSX5O60225 188 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 KCNJ13O60928 360 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TIPRLO75663 272 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PAHP00439 452 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 BMP3P12645 472 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 MSH3P20585 1137 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 F8A1P23610 371 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 ALDH4A1P30038 563 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 HOXA13P31271 388 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 FMO4P31512 558 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CBX5P45973 191 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 C1QBPQ07021 282 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TROAPQ12815 778 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 RUNDC3AQ59EK9 446 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 DPY19L3Q6ZPD9 716 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 LRRC55Q6ZSA7 311 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PPIL6Q8IXY8 311 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CBR4Q8N4T8 237 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 EBF4Q9BQW3 602 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 GANQ9H2C0 597 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TRIM45Q9H8W5 580 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 COG4Q9H9E3 785 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 XPNPEP1Q9NQW7 623 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 ITM2CQ9NQX7 267 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 KLHL11Q9NVR0 708 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 ING3Q9NXR8 418 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TRAF6Q9Y4K3 522 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 GAKO14976 1311 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SF3B1O75533 1304 aaKnown RBP eCLIP7.74□□□□□ -1.175e-6■■■■■ 79.7
VTI1A-201ENST00000393077 RGSL1A5PLK6 1076 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L15C9J2P7 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L10C9JJH3 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L13C9JLJ4 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L11C9JVI0 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L18D6R9N7 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L22D6RA61 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L17D6RBQ6 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L19D6RCP7 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L20D6RJB6 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 NDUFS2O75306 463 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 HLA-DRAP01903 254 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SSTR3P32745 418 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CASP2P42575 452 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 YAP1P46937 504 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L24Q0WX57 530 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 PMS2P3Q13401 168 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 APOFQ13790 326 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 BMPR2Q13873 1038 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 IKBKEQ14164 716 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CDC42EP5Q6NZY7 148 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 DARS2Q6PI48 645 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 USP17L6PQ6QN14 398 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 KLHL17Q6TDP4 642 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TPH2Q8IWU9 490 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 FIBCD1Q8N539 461 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM35BQ8NCS4 154 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SLC30A5Q8TAD4 765 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SNAPC3Q92966 411 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 RCN3Q96D15 328 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 MTERF3Q96E29 417 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SNX18Q96RF0 628 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 BLOC1S4Q9NUP1 217 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms