RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LOC105371267A0A1B0GV96 52 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 TEX28O15482 410 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 ADAM12O43184 909 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 HNRNPCL1O60812 293 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 DCTN3O75935 186 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 RFC2P35250 354 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 ARSEP51690 589 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 CDH6P55285 790 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 CTAG1AP78358 180 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 MAPRE1Q15691 268 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 FAM182AQ5T1J6 154 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 DUPD1Q68J44 220 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 DDHD1Q8NEL9 900 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 TMEM175Q9BSA9 504 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 ABHD14A-ACY1A0A1B0GW23 586 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 TNFRSF10BO14763 440 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 TRMUO75648 421 aaKnown RBP19.35■□□□□ 0.69
CCDC50-202ENST00000392456 VNN2O95498 520 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 AMHP03971 560 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 RPL17P18621 184 aaKnown RBP19.35■□□□□ 0.69
CCDC50-202ENST00000392456 MZF1P28698 734 aaPredicted RBP19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SLC5A2P31639 672 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SULT1E1P49888 294 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 TUBA4AP68366 448 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SLC29A2Q14542 456 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 NR1D2Q14995 579 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 TAZQ16635 292 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SLC25A52Q3SY17 297 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 HSP90AA5PQ58FG0 334 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 NEK10Q6ZWH5 1172 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 UBE2Q1Q7Z7E8 422 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SIX5Q8N196 739 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 PYROXD1Q8WU10 500 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 NT5C3BQ969T7 300 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 ZNF689Q96CS4 500 aaPredicted RBP19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SLC2A13Q96QE2 648 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 C10orf88Q9H8K7 445 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 POPDC2Q9HBU9 364 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 ZDHHC7Q9NXF8 308 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SLC27A5Q9Y2P5 690 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 NDC80O14777 642 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 AP1G1O43747 822 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 CST8O60676 142 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 DAB1O75553 588 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 TFAP2AP05549 437 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 ENPP1P22413 925 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 SLC5A3P53794 718 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 DPYSL3Q14195 570 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 GRAMD2AQ8IUY3 354 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 PYROXD2Q8N2H3 581 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 NPY6RQ99463 290 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 ERP44Q9BS26 406 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 RC3H2Q9HBD1 1191 aaKnown RBP19.35■□□□□ 0.69
CCDC50-202ENST00000392456 DNPEPQ9ULA0 475 aa19.35■□□□□ 0.69
CCDC50-202ENST00000392456 CCDC160A6NGH7 325 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 TBC1D4O60343 1298 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 ENDOD1O94919 500 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 APOEP02649 317 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 NCAM1P13591 858 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 EIF2B2P49770 351 aaKnown RBP19.34■□□□□ 0.69
CCDC50-202ENST00000392456 NME3Q13232 169 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 TRIP13Q15645 432 aaPredicted RBP19.34■□□□□ 0.69
CCDC50-202ENST00000392456 PM20D1Q6GTS8 502 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 SPERTQ8NA61 448 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 ZFP28Q8NHY6 868 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 PIGVQ9NUD9 493 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 SNX24Q9Y343 169 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 USP3Q9Y6I4 520 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 ANKRD34BA5PLL1 514 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 M0QYT0 321 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 EFEMP2O95967 443 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 LTFP02788 710 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 NOS2P35228 1153 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 RNF19BQ6ZMZ0 732 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 MAGEB18Q96M61 343 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 TTPALQ9BTX7 342 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 MLXIPLQ9NP71 852 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 ANLNQ9NQW6 1124 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 MTMR10Q9NXD2 777 aa19.34■□□□□ 0.69
CCDC50-202ENST00000392456 I6L893 689 aaPredicted RBP19.33■□□□□ 0.69
CCDC50-202ENST00000392456 C2CD2LO14523 706 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 MSL3P1P0C860 447 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 PTPN7P35236 360 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.69
CCDC50-202ENST00000392456 PPP2R5EQ16537 467 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 NDUFA5Q16718 116 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 BOLA3Q53S33 107 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 PPP6R3Q5H9R7 873 aaPredicted RBP19.33■□□□□ 0.69
CCDC50-202ENST00000392456 BNIPLQ7Z465 357 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 FAM20CQ8IXL6 584 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 DCP1BQ8IZD4 617 aaKnown RBP19.33■□□□□ 0.69
CCDC50-202ENST00000392456 IGSF21Q96ID5 467 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 AASDHPPTQ9NRN7 309 aa19.33■□□□□ 0.69
CCDC50-202ENST00000392456 PABPC1P11940 636 aaKnown RBP19.33■□□□□ 0.68
CCDC50-202ENST00000392456 POLR2EP19388 210 aaKnown RBP19.33■□□□□ 0.68
CCDC50-202ENST00000392456 SLCO1A2P46721 670 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 MED21Q13503 144 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 CCNG2Q16589 344 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 NADK2Q4G0N4 442 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 SPOUT1Q5T280 376 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms