RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 OR8H3Q8N146 312 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF512Q96ME7 567 aaPredicted RBP16.37■□□□□ 0.21
SHANK1-204ENST00000391814 COPS4Q9BT78 406 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 DCDC2CA8MYV0 355 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 EDF1O60869 148 aaKnown RBP16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ENDOD1O94919 500 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 VCLP18206 1134 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 CDH17Q12864 832 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 C6orf183Q5T699 404 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 SKA1Q96BD8 255 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 MCUBQ9NWR8 336 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 LYVE1Q9Y5Y7 322 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 GAKO14976 1311 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 A0A087WZ62 844 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 FAM92AA1XBS5 289 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 MATN2O00339 956 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 NOS1APO75052 506 aaPredicted RBP16.37■□□□□ 0.21
SHANK1-204ENST00000391814 IFI30P13284 250 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 FRMD7Q6ZUT3 714 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 CDK20Q8IZL9 346 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 METTL6Q8TCB7 284 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 EEF1AKMT1Q8WVE0 214 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ALG9Q9H6U8 611 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 TRIM17Q9Y577 477 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 IQCMA0A1B0GVH7 501 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 BTN3A1O00481 513 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 TSPAN8P19075 237 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 FMO4P31512 558 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 SLC25A24Q6NUK1 477 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 HERC6Q8IVU3 1022 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 BAIAP2Q9UQB8 552 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 FOXO6A8MYZ6 492 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 CHADO15335 359 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 FESP07332 822 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 TAF6P49848 677 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 GALNT5Q7Z7M9 940 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 TAAR1Q96RJ0 339 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 CARD8Q9Y2G2 431 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 PREX2Q70Z35 1606 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 CTSHP09668 335 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 PSMD4P55036 377 aaKnown RBP16.36■□□□□ 0.21
SHANK1-204ENST00000391814 SOX10P56693 466 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 VPS35Q96QK1 796 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 RAPGEFL1Q9UHV5 662 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 RRN3P2A6NIE6 340 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 POLD2P49005 469 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 SLC5A3P53794 718 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 AQP4P55087 323 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 AMPD2Q01433 879 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 PTPN20Q4JDL3 420 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 LNX1Q8TBB1 728 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-204ENST00000391814 RPRD1AQ96P16 312 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-204ENST00000391814 SSR3Q9UNL2 185 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 AREL1O15033 823 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 MGRN1O60291 552 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 ACAT1P24752 427 aaKnown RBP16.36■□□□□ 0.21
SHANK1-204ENST00000391814 EPHA3P29320 983 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 S100A3P33764 101 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 CCNFP41002 786 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 CRATP43155 626 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 MIIPQ5JXC2 388 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 GCNT7Q6ZNI0 430 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 COMMD2Q86X83 199 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 BAP1Q92560 729 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 PTGFRNQ9P2B2 879 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 C3orf18Q9UK00 162 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 NRP2O60462 931 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 GH1P01241 217 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 GLRA2P23416 452 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 HMGCS2P54868 508 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 BNIP2Q12982 314 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 IL18Q14116 193 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 IER5Q5VY09 327 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 GK5Q6ZS86 529 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 PRPF19Q9UMS4 504 aaKnown RBP16.36■□□□□ 0.21
SHANK1-204ENST00000391814 CRYL1Q9Y2S2 319 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 SPEF1Q9Y4P9 236 aa16.36■□□□□ 0.21
SHANK1-204ENST00000391814 OGTO15294 1046 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 SH3BGRLO75368 114 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ALDH1A1P00352 501 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 PHC1P78364 1004 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 TROAPQ12815 778 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 FAM117BQ6P1L5 589 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 NCANO14594 1321 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 KPNA5O15131 536 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-204ENST00000391814 NR3C2P08235 984 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 COX7A2P14406 83 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 IST1P53990 364 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF177Q13360 481 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms